PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000240167

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

CPP

Protein Properties

Length: 1085aa MW: 119600 Da PI: 8.1926

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000240167	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.5	4.1e-16	869	908	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnC+ks+ClkkYCeCf+ g+ C+ C+C +CkN+ MDP0000240167 869 RHKRGCNCRKSSCLKKYCECFQGGAGCGILCRCVGCKNTF 908 589***********************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05910	1.1E-99	120	386	IPR008586	Protein of unknown function DUF868, plant
PROSITE profile	PS51634	16.456	811	909	IPR005172	CRC domain
SMART	SM01114	9.6E-17	869	910	IPR033467	Tesmin/TSO1-like CXC domain
Pfam	PF03638	1.8E-11	871	907	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 1085 aa Download sequence Send to blast
MMEEAVAGWA SFDYGLKLFN VHILTXPLTC XQFSSQIHEQ HDLGDVEPNK YKSNKQEDNC 60 EQVHVKTTSL XVAINNASGA SNADQIKAGL SDFEAFLSWV FAPGQFEVAD SSSSNSSRGA 120 QNLVTCMYQC RLRGRSCLIT VTWSRNLMGQ GLSVGIDDSS NQCLCKVDIK PWLFSKRRGS 180 KSLEAYSSKI DIYWDLSLAK FGSGPEPLEG YYVGVVVDRQ MLLLLGDMRK EAFKKTSASP 240 VPSSAVCVAK REHIFGKRGF TTKAQFCNNG QVHDLVIECD TVGVNDPCLL VRVDSKPVMQ 300 VKRLRWKFRG NHTILVDGLA VEVFWDVHNW LFGTSPGNAV FMFKTCLSAE KLWASQPASD 360 PSALQWSFSQ RFSDSKSQGL GFSLILAQNS SVYALAETRN NHIFRLLYPL PSAELLRYLP 420 LRVSTAQTRP QIWRRLSLRG GRDSPVFNYI SNLSPIEPVK SVGNDHHTFN SLAFASLPSI 480 FASPQNLSVP ETRFLLRRHH FSDSPKPESF QSGNRNSKSD GVPVSVEQAY LGTDQPECFA 540 SGSSSDVEVA SAVPTENLEP PVEFLNTLKY SSGSPHRNDV HHSKGRHSFF ERETHLRRIR 600 RVEQKKDAAA CDLVRLISDD QLKFDLTTIK ENCAGHDPKP VDPGEISFMS NILRDNDIEV 660 EESAGPIDSC EECELGKVSN QPEGXRGTKE TDQAPAILSE TLLDKLNVND PSGIVDEKSL 720 NCIHSSCKPS SQSYAIRRRC LDFERPAAHK RKSIDASGGS LALPQSSCEV ASVEKQLVQT 780 IKGCDYSSSR LPGIGLHLNA LATSSESNLS KVVKHDISES RAINFPNSKI SSTSLTPSEV 840 SCDESCKNKA QVAETPPQXE TNSTPSSARH KRGCNCRKSS CLKKYCECFQ GGAGCGILCR 900 CVGCKNTFGR KDESKQAEVG GDESVVPNKD ALNVSLPTTP PDQLTSSSNG KQKIFSLHSV 960 VSSPQLEKHL QAIPEDGTLE TLXSSGSHKS SSPNSKRVSP PHSGSEFGSA WRGGRKLRKI 1020 YVSGCPKVQY MNVRARRLPS FNVYRFSQSV KEARFDASKR MICSFDNEVC DRSTFLSRIT 1080 VKLDA

Sequence ? help Back to Top

Protein Sequence Length: 1085 aa Download sequence Send to blast

MMEEAVAGWA SFDYGLKLFN VHILTXPLTC XQFSSQIHEQ HDLGDVEPNK YKSNKQEDNC  60
EQVHVKTTSL XVAINNASGA SNADQIKAGL SDFEAFLSWV FAPGQFEVAD SSSSNSSRGA  120
QNLVTCMYQC RLRGRSCLIT VTWSRNLMGQ GLSVGIDDSS NQCLCKVDIK PWLFSKRRGS  180
KSLEAYSSKI DIYWDLSLAK FGSGPEPLEG YYVGVVVDRQ MLLLLGDMRK EAFKKTSASP  240
VPSSAVCVAK REHIFGKRGF TTKAQFCNNG QVHDLVIECD TVGVNDPCLL VRVDSKPVMQ  300
VKRLRWKFRG NHTILVDGLA VEVFWDVHNW LFGTSPGNAV FMFKTCLSAE KLWASQPASD  360
PSALQWSFSQ RFSDSKSQGL GFSLILAQNS SVYALAETRN NHIFRLLYPL PSAELLRYLP  420
LRVSTAQTRP QIWRRLSLRG GRDSPVFNYI SNLSPIEPVK SVGNDHHTFN SLAFASLPSI  480
FASPQNLSVP ETRFLLRRHH FSDSPKPESF QSGNRNSKSD GVPVSVEQAY LGTDQPECFA  540
SGSSSDVEVA SAVPTENLEP PVEFLNTLKY SSGSPHRNDV HHSKGRHSFF ERETHLRRIR  600
RVEQKKDAAA CDLVRLISDD QLKFDLTTIK ENCAGHDPKP VDPGEISFMS NILRDNDIEV  660
EESAGPIDSC EECELGKVSN QPEGXRGTKE TDQAPAILSE TLLDKLNVND PSGIVDEKSL  720
NCIHSSCKPS SQSYAIRRRC LDFERPAAHK RKSIDASGGS LALPQSSCEV ASVEKQLVQT  780
IKGCDYSSSR LPGIGLHLNA LATSSESNLS KVVKHDISES RAINFPNSKI SSTSLTPSEV  840
SCDESCKNKA QVAETPPQXE TNSTPSSARH KRGCNCRKSS CLKKYCECFQ GGAGCGILCR  900
CVGCKNTFGR KDESKQAEVG GDESVVPNKD ALNVSLPTTP PDQLTSSSNG KQKIFSLHSV  960
VSSPQLEKHL QAIPEDGTLE TLXSSGSHKS SSPNSKRVSP PHSGSEFGSA WRGGRKLRKI  1020
YVSGCPKVQY MNVRARRLPS FNVYRFSQSV KEARFDASKR MICSFDNEVC DRSTFLSRIT  1080
VKLDA

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Mdo.9447	0.0	bud\| fruit

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028945965.1	0.0	protein tesmin/TSO1-like CXC 3
TrEMBL	A0A498ILT2	0.0	A0A498ILT2_MALDO; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-23	TESMIN/TSO1-like CXC 2

Link Out ? help Back to Top
Phytozome	MDP0000240167