PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000246258
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 249aa    MW: 28350.3 Da    PI: 9.2664
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000246258genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-1072120555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    h e+Er+RR+++    + Lr+llP  +   ++K s ++   +Av+YIk+Lq
  MDP0000246258  72 HRENERQRRQEMGILHASLRSLLPLEF--IKGKRSISDHMNEAVNYIKHLQ 120
                    99***********************65..*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.78E-765124No hitNo description
SuperFamilySSF474593.01E-1167137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.93567119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-872138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-772120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MFPLHQSKKL VFQISSNPRH HHDHTISEDR RVPEHGNMGK SRRRKLAVTL DYMMDDDHKS  60
NDHNKKKKMF IHRENERQRR QEMGILHASL RSLLPLEFIK GKRSISDHMN EAVNYIKHLQ  120
NRIKRLDAKR AELKKVSDLI SSSTSTDDHG GESSYGGSPS CFTVHPCCGG VQIVISTAIG  180
FRSGEEGLRF SISRVLEVLL EQGLCVVSCV SSKIDDRLLH TIQSEVNDLE SINLSALEHK  240
LDEVLPRSK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009348628.11e-176PREDICTED: transcription factor bHLH36-like
TrEMBLA0A498KJX60.0A0A498KJX6_MALDO; Uncharacterized protein
STRINGXP_008376673.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-43bHLH family protein