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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MDP0000247514 |
| Common Name | SCL32 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
GRAS |
| Protein Properties |
Length: 476aa MW: 53228.8 Da PI: 5.9315 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000247514 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 299.1 | 1.1e-91 | 59 | 473 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl..fsevsPilkfs 94
++lL++cA+a++++d++l+q++L+ l+++a +dgd++qRl+ f++AL ar ar + ++ +a++ s+++ + +++++++ +l f +++P+++f+
MDP0000247514 59 EQLLVHCANAIETNDATLTQQILWVLNNIAPQDGDSNQRLTCAFLRALIARAARiGSCKVLAAMANSQANFTIHTHKFSVIELasFIDLTPWHRFG 154
79****************************************************5444666677777777666777777777788*********** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl... 181
+ +aN aIleaveg + vHi+D+++++++Q p+L +a+asR+ +pp l++T+ g e ++ee+g +L +fA++ ++ +ef+v+
MDP0000247514 155 FTAANAAILEAVEGYSVVHIVDLSLTHCMQIPTLVDAIASRQdanVSPPLLKLTVAGTTEDIppmLDLSYEELGFKLVNFARSRNIVLEFRVIpss 250
******************************************777779**********776698888999***********************888 PP
GRAS 182 ....vakrledleleeLrvkp.gEalaVnlvlqlhrll............................desvsleserdevLklvkslsPkvvvvveq 244
a+ +++l++++L + gEal+Vn++++lh+++ ++s +++s r+ +Lk++++l P++vv+v++
MDP0000247514 251 ytdgFANLIQQLRVQNLVYAEsGEALVVNCHMMLHYIPeetltlpsinlnpsssgstssyafdvasSSSSTTPSLRTMFLKALRGLDPTIVVLVDE 346
5555555555556666655559******************************************98888888899********************* PP
GRAS 245 eadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll 340
+ad++s++++ r+ +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a eg++r+er e + +W +r+++a F++v ++e+a++++k++
MDP0000247514 347 DADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-VCWKIENVIAYEGFQRVERLEPKCRWVQRMRNANFRSVLFGEDAVSEVKAM 441
********************************************.99************************************************* PP
GRAS 341 lrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
l +++ g+ ++ e++ +vl+Wk++++v+++aW
MDP0000247514 442 LDEHA-AGWGLKREDEDVVLTWKGHNVVFATAW 473
*****.999************************ PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 476 aa
Download sequence Send
to blast |
MMQFTETPPP TSLHQIIPTP YSNNLQMMNK NQTHRTRPWP GFPTPKSLGT NFGDANCMEQ 60
LLVHCANAIE TNDATLTQQI LWVLNNIAPQ DGDSNQRLTC AFLRALIARA ARIGSCKVLA 120
AMANSQANFT IHTHKFSVIE LASFIDLTPW HRFGFTAANA AILEAVEGYS VVHIVDLSLT 180
HCMQIPTLVD AIASRQDANV SPPLLKLTVA GTTEDIPPML DLSYEELGFK LVNFARSRNI 240
VLEFRVIPSS YTDGFANLIQ QLRVQNLVYA ESGEALVVNC HMMLHYIPEE TLTLPSINLN 300
PSSSGSTSSY AFDVASSSSS TTPSLRTMFL KALRGLDPTI VVLVDEDADL TSNNLVCRLR 360
SAFNYLWIPY DTVDTFLPRG SKQRQWYEAD VCWKIENVIA YEGFQRVERL EPKCRWVQRM 420
RNANFRSVLF GEDAVSEVKA MLDEHAAGWG LKREDEDVVL TWKGHNVVFA TAWIPA
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
