PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000250947
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 528aa    MW: 57816 Da    PI: 4.1802
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000250947genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.71.1e-12235280550
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                    +r++r++kNRe+A rsR+RK+a++ +Le +v  L + N+ Lkk+ +
  MDP0000250947 235 RRQKRMIKNRESAARSRARKQAYTSQLEHEVFRLRKMNSWLKKQKK 280
                    69*************************************9998755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.0E-7231288IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.818233278IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.99E-10235286No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-12235281No hitNo description
PfamPF001705.6E-11235281IPR004827Basic-leucine zipper domain
CDDcd147072.81E-22235282No hitNo description
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MDDRTLGSGN GGERPQFPPL ANLDGVQSQL GNIGSKPLNG MHFDELLKNV ISADEGQLLQ  60
NPNSSSFSTS FFLGNLNGAL SKKSADEVWK GISHHELANS AANESLHQRN IRETAATPEH  120
FLVRTGAINL GNQNAMMNAQ PVMGIDPAVM VSQPADWFQF QVSAVQQRMT MLDSNFKVCE  180
SVYDNSTVNN XDYSENQVGM SIPMPAISAS SSESHATAEK KRHFSDEIKE KTIERRQKRM  240
IKNRESAARS RARKQAYTSQ LEHEVFRLRK MNSWLKKQKK QDESKYMSYW IPIWSWLSPT  300
CGEQLHTATG RXAYVVESVQ METKSRTSTG RGASAAVQLL EATFGQFLLL TCAWDALLAN  360
LLTASALLSL PQDPSALSTT CGQKSHGDDE SEHSNSKAVD GDKDGGEDKN GDGGLGDTEE  420
ELSSEDGGGA GDNPNRKSNN SKASPGGEGG EVGEEGEEEE EEDGNENDDD GEDDGDDGDE  480
GNEDDDDSDD DDEGEVKDEE EIVDEDEPED DEEEDEEEAL QPPKKRKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1523527KKRKK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.106860.0bud| fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008365215.20.0ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLA0A498J6Q60.0A0A498J6Q6_MALDO; Uncharacterized protein
STRINGXP_008365215.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.17e-26ABA-responsive element binding protein 3