PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000250967

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

bZIP

Protein Properties

Length: 1018aa MW: 113281 Da PI: 8.2687

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000250967	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.5	1.6e-09	732	771	5	44
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKka++++Le+ L++ ++ MDP0000250967 732 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLSQLEQE 771 788*************************976666655554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04515	1.9E-50	162	456	IPR007603	Choline transporter-like
SMART	SM00338	2.0E-8	728	799	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.427	730	774	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	4.6E-6	730	774	IPR004827	Basic-leucine zipper domain
CDD	cd14708	4.96E-25	732	782	No hit	No description
SuperFamily	SSF57959	2.94E-6	732	775	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.5E-6	734	770	No hit	No description
PROSITE pattern	PS00036	0	735	750	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	5.3E-30	817	890	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1018 aa Download sequence Send to blast
MNNISHSFSS STSSSVNSAS ITTXDPNAIS SRRSMDGSQA LAAEPSRRWR DIFWLGVFLI 60 HLVLVGCALI VLGINRFKKT DRLNIDRYTQ RFLENQRGLT ENYWLLYALA GGVGTLLGWT 120 WLFFLRSQAN HMMKFAVHIL TTYLAVISVL LFWMEQFFWG VAFAIGAVLQ FMYVLSIVDR 180 LPFTMLVLQA AVKMVWSLRE VMRVAYAFML IMLVWMVXWS FGAAGVVASS IGDGGRWWLL 240 VVLSISLFWT GAVLCNTVHV IVSGMXFLVL IHGGREAPSM PPNSLMKSLR YAVTTSFGSI 300 CYGSLFTAFI RTLRWKIRGV RSKIGNNECL LCCVDFLFNL VETLVRFFNK YAYVQIAVSG 360 KGFNHSARDA WELFQSTGVE ALVAYDCSGA VLLMGTVLGG LITGTSAGIW TWIKYRDRVV 420 MVGSTAMLMG MVLVGIAMVV VEGAVTSIYI CYAEDPLLIH RWRCFAKDFS GDAFVTSAPL 480 TGYSHGGCTR RLLQLVARNM EGNLPTLKHQ TGDDSDRNQT RFADLGELEQ SATAFPXDDA 540 VVLSPSAGSM FSLKANNVSV VPDGLHYGAL NVGGCLDIGS TITGTGGGGG GGCVDTVQQQ 600 PYMYQQQKGR PSSGNGHFEN WGDNSAMADN SQQTDTSTDV DTDDKNQANG IENRXKFGIL 660 DYHRSLDYRA VCSESPSRIL ELFRLTLCQL KKSFQKAFNS ISTLNNLHGV QHGALVVVDS 720 MEQAKERTGD QKTLRRLAQN REAARKSRLR KKAYVQQLEN SRLRLSQLEQ ELQRARQQGI 780 FIXNGLPGDH GHSXAGNGAL TFDLEYAHWL EEHQRLIHDM RSAVNCHMGD NELRILVDSV 840 MTHYDEIFRL KSIAAKTDVF HMLSGMWQTP TERCFMWLGG FRSSELLKIL GNHLEPLTDQ 900 QLMGICNLQQ SSQQAEDALS QGMEALQQSL VETLSSANHC PTGSGNVADY MGQMAIAMGK 960 LATLENFLYQ ADLLRQQTLQ QLHRILTTRQ AARALLVISD YFSRLRALSS LWQARPRD

Sequence ? help Back to Top

Protein Sequence Length: 1018 aa Download sequence Send to blast

MNNISHSFSS STSSSVNSAS ITTXDPNAIS SRRSMDGSQA LAAEPSRRWR DIFWLGVFLI  60
HLVLVGCALI VLGINRFKKT DRLNIDRYTQ RFLENQRGLT ENYWLLYALA GGVGTLLGWT  120
WLFFLRSQAN HMMKFAVHIL TTYLAVISVL LFWMEQFFWG VAFAIGAVLQ FMYVLSIVDR  180
LPFTMLVLQA AVKMVWSLRE VMRVAYAFML IMLVWMVXWS FGAAGVVASS IGDGGRWWLL  240
VVLSISLFWT GAVLCNTVHV IVSGMXFLVL IHGGREAPSM PPNSLMKSLR YAVTTSFGSI  300
CYGSLFTAFI RTLRWKIRGV RSKIGNNECL LCCVDFLFNL VETLVRFFNK YAYVQIAVSG  360
KGFNHSARDA WELFQSTGVE ALVAYDCSGA VLLMGTVLGG LITGTSAGIW TWIKYRDRVV  420
MVGSTAMLMG MVLVGIAMVV VEGAVTSIYI CYAEDPLLIH RWRCFAKDFS GDAFVTSAPL  480
TGYSHGGCTR RLLQLVARNM EGNLPTLKHQ TGDDSDRNQT RFADLGELEQ SATAFPXDDA  540
VVLSPSAGSM FSLKANNVSV VPDGLHYGAL NVGGCLDIGS TITGTGGGGG GGCVDTVQQQ  600
PYMYQQQKGR PSSGNGHFEN WGDNSAMADN SQQTDTSTDV DTDDKNQANG IENRXKFGIL  660
DYHRSLDYRA VCSESPSRIL ELFRLTLCQL KKSFQKAFNS ISTLNNLHGV QHGALVVVDS  720
MEQAKERTGD QKTLRRLAQN REAARKSRLR KKAYVQQLEN SRLRLSQLEQ ELQRARQQGI  780
FIXNGLPGDH GHSXAGNGAL TFDLEYAHWL EEHQRLIHDM RSAVNCHMGD NELRILVDSV  840
MTHYDEIFRL KSIAAKTDVF HMLSGMWQTP TERCFMWLGG FRSSELLKIL GNHLEPLTDQ  900
QLMGICNLQQ SSQQAEDALS QGMEALQQSL VETLSSANHC PTGSGNVADY MGQMAIAMGK  960
LATLENFLYQ ADLLRQQTLQ QLHRILTTRQ AARALLVISD YFSRLRALSS LWQARPRD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A498HHC6	0.0	A0A498HHC6_MALDO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5396	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-135	bZIP family protein

Link Out ? help Back to Top
Phytozome	MDP0000250967