 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000253370 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
MYB_related |
| Protein Properties |
Length: 539aa MW: 59958.1 Da PI: 5.9222 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000253370 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 24 | 8.9e-08 | 373 | 404 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32
rg WT+ Ed +++ +v ++G g+W++++++ g
MDP0000253370 373 RGLWTAAEDAKILAYVSKHGVGNWTLVPKKAG 404
788**************************988 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0031418 | Molecular Function | L-ascorbic acid binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MDLGYFLALS LCFLCISXHL AHSLVPGSLD EKKTEGSVIR XRRGASSATF DPTRVSQLTW 60
RPRAFLFKGF LSEEECDHLI EIAKNKLEKS MVADNESGKS IESEVRTSSG MFLLKAQDEV 120
VANIEARIAA WTFLPIENGE SIQILHYEHG QKYEPHFDYF HDKANQQLGG HRIATVLMYL 180
SNVEKGGETV FPNSEGKLSQ IKDDDASDCA KDGYSVKPYK GDALMFFSLH PNGTTDPSSL 240
HGSCPVIEGE KWSATKWIHV RSFEKSLLKS ATGKGCSDEN DNCPLWAKAG RVAXRVRPKG 300
GQYLQSAVKC LGVHNIELCH SEIYVRSCCA PDGNFRTLFI CCAVYYYKNE NFNLGVLTKY 360
SXPPCCDKSN VKRGLWTAAE DAKILAYVSK HGVGNWTLVP KKAGIPYTNV TXNPNINGQG 420
FSQPTNACWE SHEAQITPSS SSFNWREYLL YDPFTSADHL KQEQDLHGVM MSSPENPTFG 480
VQGSSDAIEG CDFVGQRSYD WPDHQASSTS MCSFVETILD QDSEMQAAFP QLLDASFDY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2jig_A | 5e-86 | 55 | 260 | 13 | 217 | PROLYL-4 HYDROXYLASE |
| 2jig_B | 5e-86 | 55 | 260 | 13 | 217 | PROLYL-4 HYDROXYLASE |
| 2jij_A | 6e-86 | 55 | 260 | 22 | 226 | PROLYL-4 HYDROXYLASE |
| 2jij_B | 6e-86 | 55 | 260 | 22 | 226 | PROLYL-4 HYDROXYLASE |
| 2jij_C | 6e-86 | 55 | 260 | 22 | 226 | PROLYL-4 HYDROXYLASE |
| 2v4a_A | 6e-86 | 55 | 260 | 22 | 226 | PROLYL-4 HYDROXYLASE |
| 2v4a_B | 6e-86 | 55 | 260 | 22 | 226 | PROLYL-4 HYDROXYLASE |
| 2v4a_C | 6e-86 | 55 | 260 | 22 | 226 | PROLYL-4 HYDROXYLASE |
| 2v4a_D | 6e-86 | 55 | 260 | 22 | 226 | PROLYL-4 HYDROXYLASE |
| 3gze_A | 4e-86 | 55 | 260 | 14 | 218 | Predicted protein |
| 3gze_B | 4e-86 | 55 | 260 | 14 | 218 | Predicted protein |
| 3gze_C | 4e-86 | 55 | 260 | 14 | 218 | Predicted protein |
| 3gze_D | 4e-86 | 55 | 260 | 14 | 218 | Predicted protein |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. |
