PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000261154
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 873aa    MW: 99727.2 Da    PI: 9.0572
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000261154genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.16e-11772816549
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                    ++ rr+++NRe+ArrsR RK++ ie+L++ v  L  eN++L k+l
  MDP0000261154 772 RKRRRMISNRESARRSRMRKQKHIENLRNQVNRLRVENRELNKRL 816
                    5789*************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF566725.93E-5253287No hitNo description
SMARTSM003381.6E-14768832IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909770816IPR004827Basic-leucine zipper domain
PfamPF001701.5E-9772816IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-10772822No hitNo description
Gene3DG3DSA:1.20.5.1703.6E-8772816No hitNo description
CDDcd147027.32E-22773820No hitNo description
PROSITE patternPS000360775790IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 873 aa     Download sequence    Send to blast
MGYYNNLQNC HPFXKLDFPI FSEGDDPLRW IYKAEHYFDF FNIEDSKKVK LASFHMEGEA  60
LQCPSELEDS VENLVKLKQL GTLKDYVLDF RRLANRMRDI SPALLKLCFI GGLKPELRHD  120
VKLLKPKNVL DVAAFAXQID AKLTNLKVKA KPPYLQSNFG SPLQNLNXTM VGDNRPRPXN  180
IRRLTPXEIN HCRKNGLCFH CKDKFVKGHT CERKQHFLID VQDSELDDTE NIEIEELEIT  240
ACALFGTPAP PTIQTMKVLA LPDFSKPFVI ETDASGHGIG XVLQQEGFDY EIQFKQGCNN  300
QATDALSRSP LTTSDPQLHA LXEGELRAIS YPYSQWMDDL SKDLXKDQWI ISKIQNLGAT  360
EDNNVPIPNL KFKVDNGLLK YKGRIEGMKK FIKELVACCL TCQQNKYETL APXGFLHPLX  420
IPTRVWTDIS MYFIALLFVI VRVTIHNQMA RHKWFIDALG TYLRCLCCLQ PKKXALXLSW  480
XEWSYDTSFH SATKMTPFEI VYGQLXRFYX PFQVLAKVGP IAYKLQLPEH CKLDLVFHXS  540
CLKKQLGANV QATVNLPIII DSGILKDAPV AILDSKMIKK NNTAVTEKIR SLCSXEDPIP  600
SLRTLTLIKA PRSIVPPDSS KALYIXGLLK QYGFGQKFGF KYEAPTLRSF PFLLPPPSLS  660
KLQVQRVFIV ATMXSAVPAM LPSDSLLHFP TFDGGFIPDG FTPWDCSEHF PAIPSPXPVI  720
STLSSSPVQS PKTVILSSGS DDDPNRPDRT HANAKSCQND DSNRRVSVVD ERKRRRMISN  780
RESARRSRMR KQKHIENLRN QVNRLRVENR ELNKRLRIVL YHFQLVRTDN DRLRSDHVML  840
LQKLSDIRQI LVFRQHLSSA WPCDTIILQQ TPX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1771775RKRRR
2771792RKRRRMISNRESARRSRMRKQK
3784791RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.164320.0bud| fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.29e-33basic leucine-zipper 6