PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000264909

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

Dof

Protein Properties

Length: 203aa MW: 23293.5 Da PI: 9.9323

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000264909	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	28	4.7e-09	159	203	3	47
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalr 47 +k+++c+rC tnt f y+n l + C+ C+r W G lr MDP0000264909 159 KKTIPCARCGGTNTTFRYFNQGDLRKDTRKCHDCNRAWVVGAKLR 203 6889*************************************9998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.4E-7	160	203	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	5.0E-4	162	203	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence Send to blast
MDGLPARGVR KREIIPDIVE VINLEEDNAA QERVVLSTHL FYLPHNPVNF CHLVILNSSD 60 RCLKLRSKSL NNIGELERIR EENKVHVKEE RAVEAKKPET QKKDVERKPR SQPETQKDVE 120 RKKKPEVVNK NGREEAGSSR PALHPAADER DRAGEEARKK TIPCARCGGT NTTFRYFNQG 180 DLRKDTRKCH DCNRAWVVGA KLR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008352778.1	5e-95	dof zinc finger protein 5-like isoform X1
TrEMBL	A0A498JW51	3e-98	A0A498JW51_MALDO; Uncharacterized protein
STRING	XP_008352778.1	2e-94	(Malus domestica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69570.1	6e-07	Dof family protein

Link Out ? help Back to Top
Phytozome	MDP0000264909