PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000267678
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 436aa    MW: 49039.6 Da    PI: 4.6218
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000267678genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.94.9e-1681512128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknr.atks 80 
                     pGfrF+Ptd+elv  +L+  + +++      + +++++++++  +k++P+++ +        ++ a ++  +yfFs+ +kk+++g++  r +   
  MDP0000267678   8 RPGFRFKPTDQELVGGFLHYFLVKTPrllppPPHSTFMHKCNLfgNKFQPSQIWEafgggaalQLGAADQpALYFFSELKKKTPKGSNVDRrMGLG 103
                    59****************99998888898875555679***9833589*****74478888764444455488*************9999945569 PP

            NAM  81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    g+W+ +     +  +  +++ +glk+t+ + +  + +  +  W ++ey+l
  MDP0000267678 104 GTWEGKSVPAWIEGTegNSTCIGLKRTFWYKN--EGTEDHGGWKLDEYSL 151
                    ****99998888877556666*******9973..3333589*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-187175IPR003441NAC domain
PROSITE profilePS5100522.0277176IPR003441NAC domain
PfamPF023652.9E-129151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MENHSLFRPG FRFKPTDQEL VGGFLHYFLV KTPRLLPPPP HSTFMHKCNL FGNKFQPSQI  60
WEAFGGGAAL QLGAADQPAL YFFSELKKKT PKGSNVDRRM GLGGTWEGKS VPAWIEGTEG  120
NSTCIGLKRT FWYKNEGTED HGGWKLDEYS LFASPRKRNS HTSYDFDFVL CRLRNTSGIN  180
KRKCSTSSSQ DEEVPKMKKK RANEEIEQNM XAINVVDEEG RQGNSCLTSN FVXSDQENNE  240
FMVGDYVDYG YDDNDPRFTI TAXELDDLLA KEPTDGAVXA PFPTASASEE LLLGKERKDV  300
QXPVSSVVAD GGEDQALYTN MSGEFIPETR ELPLPASSGS AEDGTVEEKA WDPSLLEQYW  360
LSKTQEEEPR NPSLYRDFMF ADGAGVEEAY HPSAFDNVVD QSLFGSSYLN SYXFYGRSVH  420
ATYFDVINFT TCRTXY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180200KRKCSTSSSQDEEVPKMKKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028956331.10.0NAC domain-containing protein 102-like
TrEMBLA0A498KEC10.0A0A498KEC1_MALDO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2762723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.14e-08NAC family protein