PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000267964
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 325aa    MW: 37180.6 Da    PI: 10.8473
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000267964genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.36.7e-08248292549
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                    kr +r   N  +A+rsR R++++i eLe  v +L++e ++L  ++
  MDP0000267964 248 KRVKRILANWQSAQRSRVRRLQYILELECGVTTLQSEVSTLLPRV 292
                    8999*********************************99997665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8244308IPR004827Basic-leucine zipper domain
PfamPF077161.9E-6246295IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.7E-10248299No hitNo description
SuperFamilySSF579591.04E-8248302No hitNo description
CDDcd147031.43E-17249299No hitNo description
PROSITE patternPS000360251266IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MAVSMVSATK RFTKAQFVSR LARSMEAELD LSFFSWHLTL RSPFLSFENA AALPTLGTFL  60
QLLSDNPAAL LLQPLIRDPD PDRRVLRLLI RQALGTPEEC QNPTATMMHH HGSTNNLDFG  120
RLDDEQLMSM FFDDDDLRGS KGSRSAEECK RRRNRRRCRT MSGRWAGSAP RISSMIERRK  180
RMMSGKIRSW RENDMSVTVP PTVSSSSPST PSHQNSNNDE NNIKKDNNNN KKPLMVHLDQ  240
QQSKIEPKRV KRILANWQSA QRSRVRRLQY ILELECGVTT LQSEVSTLLP RVAFLDHQRL  300
ILNIDNSAIK QWIAALAQDK LLKDV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151156RRNRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009340434.11e-46PREDICTED: basic leucine zipper 34-like
STRINGXP_009340434.15e-46(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.19e-37bZIP family protein