PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000270365
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 437aa    MW: 47920.4 Da    PI: 6.1694
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000270365genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.42.3e-16234293362
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                    ++kr rr+ +NRe+ArrsR+RK+a +  Le  v +L  eN++L k+l    k++ ++  +
  MDP0000270365 234 DVKRVRRMLSNRESARRSRRRKQAHVTDLEGQVSQLRVENSSLLKRLTDSDKKYNEVAVD 293
                    68**********************************************999999887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-12231287No hitNo description
SMARTSM003387.8E-20232296IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978234290IPR004827Basic-leucine zipper domain
PfamPF001701.1E-14235289IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-12236284No hitNo description
PROSITE patternPS000360239254IPR004827Basic-leucine zipper domain
PfamPF124981.0E-41303430IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MDRVFSVEEE MSDLLWSSTA PPDNGGADDD NLSKLNRSAS EWAFQRFLQE ASXYSPSPSP  60
TPPPPPHPSS SSSTAHHHDQ NDVEEIKMIN AHHHNATHTH YNNMRPPNVT VDSDEYRAFL  120
KTKLDLACAA VAMSREGSLV KAQESAVLAD SGSHASSTSQ LGSEAPSKGA GYDXSRSNDK  180
NAHAXLGXIP SLPXTKYRSA IPVRQATSGS SREMTDDEEA EGETAMNENM DPADVKRVRR  240
MLSNRESARR SRRRKQAHVT DLEGQVSQLR VENSSLLKRL TDSDKKYNEV AVDNRVLKAD  300
IETLRAKVTM AEEMVKRFTG SNPMFHAMSE VSSIGMPPFD GSPSEASIDA AVPEQDDPNH  360
HFFQPASNNP IPTHDPRVKN DSADVPSVEN VQKNSAATSS ADVSGNKMGR TPSLQRVASL  420
EHLQKRIRGG NPSNWEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248255RRSRRRKQ
2250255SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028945974.10.0light-inducible protein CPRF2-like
SwissprotQ990901e-123CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A498IKC40.0A0A498IKC4_MALDO; Uncharacterized protein
STRINGXP_009364595.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.25e-70bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]