PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000273365
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 512aa    MW: 57014.1 Da    PI: 5.8149
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000273365genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.14.3e-15306352354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h + Er+RR+++N +++ L++l+P++     +K++ a+iL  A++YI++L
  MDP0000273365 306 TKHFATERQRRQQLNGKYDILKTLVPNP-----TKNDRASILGDAIDYINEL 352
                    78**************************.....9***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.548303352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-12306352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.39E-13306356No hitNo description
SuperFamilySSF474591.21E-15306369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-13306363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-12309358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    Send to blast
MYQDTVGCNF DPNSIPESAA ESLLDLNPLS PPXPPPPQQP QVLMPCSDTH HHNNTTTNSG  60
FGVEENIRLS IEELSYHHHH HQNHHSYMDI ELQNELGFNX DNPYNNTSDH YNNINNSHLV  120
SFEHPTNWDN NIHGVHDQMQ QQFPDNTTAT STPYPQPPDL LNLFSLPRCS PSSLLQNPSI  180
TFTNPIPKTS NFPSSLGSLG DLPSAVDTPQ GTASSVLYDP IFHLNLPPQP PLFRELFQSL  240
PHGYTLPGSG NGSLFSSGGD EREGSGGGVL YDPDADGSLG RQFDSGVLEF SREMASNERG  300
RDVKGTKHFA TERQRRQQLN GKYDILKTLV PNPTKNDRAS ILGDAIDYIN ELLRSVDELK  360
LLVEKKRRGR ERGKRRKTEQ DGGSAGDDXN CNVKPLGEHH DQSYSNGSLR SSWLQRKSKD  420
TEVDVRIIDD EVTIKLVQRK KINLLLFVSR ILDEXQLDLH HVAGGHIGNS YSFLFNTKMY  480
EGSCLYASAI AGKLIEVLDI QYAAAVPPTS SY
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.302990.0bud| fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008347044.20.0transcription factor bHLH91-like
TrEMBLA0A498JHD30.0A0A498JHD3_MALDO; Uncharacterized protein
STRINGXP_009361467.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-85bHLH family protein