PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000279891
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 366aa    MW: 42199.5 Da    PI: 4.8678
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000279891genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.18.2e-1376136161
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                    +ke +r +r+ +NR++A+  R+RKk ++  Le ++keL+  N++L +++++l +e a l++
  MDP0000279891  76 DKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELDDRNSKLEEKISTLVNENAMLRK 136
                    58999**************************************************998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-1176140IPR004827Basic-leucine zipper domain
PfamPF001702.0E-1277136IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.80678141IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-1279139No hitNo description
Gene3DG3DSA:1.20.5.1706.3E-1680140No hitNo description
PROSITE patternPS0003608398IPR004827Basic-leucine zipper domain
CDDcd147044.33E-1490132No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
VPWFWSLDDD DDDGDNVPEE SDEDMFTVPD VEALPPPNNS INNAASTIAK ATSNNNNPDA  60
QSGFPAKRRR GRNPVDKEYR RLKRLLRNRV SAQQARERKK VYVNDLESRA KELDDRNSKL  120
EEKISTLVNE NAMLRKVLMN TRPKVDESIE QKQGSVKYTL SDVDREVVTI DVVCTKGIAS  180
SQSHIVDVED IPIFXGSDCI EGFLLWVEDV EKLFKTQPIP EREMVKMVAS CLDGDXGLWC  240
DHMQESRRQQ GKCPIQTWRW LKRLIVKQFF SDLYELYLEK TGQPIIXKEA KVMENDISLC  300
QETVEAXVEE KEQVIFLGEN LVXEDLRKHD NSEVEAQEIQ GSYLLAIKTV SRRTRGRVPF  360
KWRSLM
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.5040.0bud| fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_008344598.11e-116(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126402633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17609.22e-43HY5-homolog