PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000282616
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 509aa    MW: 57080.8 Da    PI: 6.3536
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000282616genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1341e-41181461127
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    lp+GfrFhPt+eel+ +yL+ k++g++  +++vi+e++i+k+ePwdLp k  +k++++ewyf+ +   k+++ +  +rat +g+Wk tg+dk v++
  MDP0000282616  18 LPVGFRFHPTEEELIGHYLQLKLRGEDSLVSDVIREINICKHEPWDLPaKsLIKSDDEEWYFYNRPIYKNNSRHDIERATXTGFWKITGRDKIVTA 113
                    79*************************9999****************95357788999************************************** PP

            NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyr 127
                    ++++++g k++L+fy+gr ++++ t Wvmhe+ 
  MDP0000282616 114 RDNKTIGKKRILTFYRGRPRQAQITPWVMHEFY 146
                    *******************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-4510167IPR003441NAC domain
PROSITE profilePS5100545.45118167IPR003441NAC domain
PfamPF023651.1E-1919146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MASNGIPFTR ATARGILLPV GFRFHPTEEE LIGHYLQLKL RGEDSLVSDV IREINICKHE  60
PWDLPAKSLI KSDDEEWYFY NRPIYKNNSR HDIERATXTG FWKITGRDKI VTARDNKTIG  120
KKRILTFYRG RPRQAQITPW VMHEFYIPQV SPNANRRDFV LCHVKKKSGK NTDVSTCDEG  180
ESSNYNNAHD FENQLQPAHN MHVEEEXTQP PPNPDIFQRH MGSMLANAHD NNDYHGTQSA  240
PGANESDGDS EEFVNTVIVD PYEAFSEQIT HANVLNNSTL PQSPRKVYLK DCGVSSGSAT  300
EVQHAVELEE GQSRGGKGVT LRNRILIQAA SSTNVLPKPQ TDRLQSVSDE DSGASRPIKK  360
SASSVDVDAD SLQINSIQLA SDEYYNNERR TYSTSALLAP GKPNELEQQQ SKAKVAAERR  420
AAVDFPPKRN FITESNKDAE AVQGNNTEKG LKQTHNATTA GNWMSCSFIS WETXPPLTSP  480
PSVYLFNTVL GAILFLVFAW EVVLYGQWC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-251816717165NO APICAL MERISTEM PROTEIN
1ut4_B7e-251816717165NO APICAL MERISTEM PROTEIN
1ut7_A7e-251816717165NO APICAL MERISTEM PROTEIN
1ut7_B7e-251816717165NO APICAL MERISTEM PROTEIN
3swm_A9e-251816720168NAC domain-containing protein 19
3swm_B9e-251816720168NAC domain-containing protein 19
3swm_C9e-251816720168NAC domain-containing protein 19
3swm_D9e-251816720168NAC domain-containing protein 19
3swp_A9e-251816720168NAC domain-containing protein 19
3swp_B9e-251816720168NAC domain-containing protein 19
3swp_C9e-251816720168NAC domain-containing protein 19
3swp_D9e-251816720168NAC domain-containing protein 19
3ulx_A8e-251816815169Stress-induced transcription factor NAC1
4dul_A7e-251816717165NAC domain-containing protein 19
4dul_B7e-251816717165NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008376245.20.0NAC domain-containing protein 69-like isoform X1
TrEMBLA0A498JJR80.0A0A498JJR8_MALDO; Uncharacterized protein
STRINGXP_008356979.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13478522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-40NAC 014