PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000293996
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 166aa    MW: 18490 Da    PI: 4.7161
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000293996genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.5e-17350253
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ykGVr++  +g+Wv+eIr+p     +  +r +lg+f+t +eAa a++aa+ + 
  MDP0000293996  3 TYKGVRQRT-WGKWVVEIREP-----HrrARLWLGTFDTSYEAALAYDAAAAAA 50
                   69****999.**********6.....226*********************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.09E-16238No hitNo description
Gene3DG3DSA:3.30.730.107.1E-23350IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-16354IPR016177DNA-binding domain
PfamPF008471.2E-12352IPR001471AP2/ERF domain
PROSITE profilePS5103218.9361IPR001471AP2/ERF domain
SMARTSM003803.2E-19367IPR001471AP2/ERF domain
PRINTSPR003678.8E-10415IPR001471AP2/ERF domain
PRINTSPR003678.8E-102642IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MCTYKGVRQR TWGKWVVEIR EPHRRARLWL GTFDTSYEAA LAYDAAAAAA WKLYGTRTNP  60
ACYAAPVKYI AVPVICNNYA NVKVDQPEXG GMKVEENMSS GVNNEGMDGI FWGKMXESFP  120
VFDDSIWTXA AMSXDLPVVA DQGIFGGGFT DGNCWETLPS SQWCMM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008364770.22e-91dehydration-responsive element-binding protein 2D-like
TrEMBLA0A498JDU07e-71A0A498JDU0_MALDO; Uncharacterized protein
STRINGXP_008364770.18e-91(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-23ERF family protein