PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000294614
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 795aa    MW: 89745.1 Da    PI: 7.996
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000294614genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.12.2e-16564662198
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                    l+pG+rF P++e+l+++yL  k +++       + i+e+d+y ++P dLp+    ++  + ++ ++F+ + +      +k+r +ksgyW+ +g+ +
  MDP0000294614 564 LAPGCRFYPSEEQLLCYYLSXKNAAEAgkSGGYDLIRELDLYGHDPFDLPEsacySYGXGGRKRHWFCYTVRIL----KKRR-AKSGYWRRQGRVR 654
                    579*****************998887744445678**************9546653333555555565555543....3445.689********** PP

            NAM  91 evlskkge 98 
                    +v+ ++g+
  MDP0000294614 655 DVVGRGGT 662
                    **997544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.559.102.8E-465224IPR023213Chloramphenicol acetyltransferase-like domain
PfamPF024585.4E-356271IPR003480Transferase
Gene3DG3DSA:3.30.559.108.2E-4245270IPR023213Chloramphenicol acetyltransferase-like domain
Gene3DG3DSA:3.30.559.101.2E-30271401IPR023213Chloramphenicol acetyltransferase-like domain
SuperFamilySSF1019414.45E-16558663IPR003441NAC domain
PROSITE profilePS5100517.202564725IPR003441NAC domain
PfamPF023655.8E-8566656IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0016747Molecular Functiontransferase activity, transferring acyl groups other than amino-acyl groups
Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    Send to blast
MNSQSVKHIS ECFIIPHHVS EESQQPLYLA PTDLAMLSVH YIQKGLLFAK PPEAMDRRHK  60
AEFVNSLLDK LKHSLSLALV HFYPLAGRFA TKKEENPPLY LVYLDCSNSP GARFIYATLD  120
VSVLDILSPT DVPLVVQSFF DHDRAVNHDG HTASLLTVQV TELVDGIFIG LSMNHCLCDG  180
TSFWHFFNTW SELFQAITQG AHDNTIVPGI SRPPVLKRWF PDGHGPIISL PYTNPDEFIG  240
RFEAPELRER MFHFSSESIA KLKAKANSEL AANNRARLDP PLSGDYFGNS IHPINSEAVT  300
AGELLQHSLG WAAWKLHEAV VKLDDREIRG FVDAWLQSPT VYLLGQFFDP YMVMMGSSPR  360
FNMYGNEFGM GKAVALRSGY ANKFGGKVSS YEGRERGSID LEDLVTGVLT GTCPSCQICH  420
XSYNXTNNXT YKIVRFWKFQ CLFVFYFRSA XXSPNPISYP TEPFTFRYDH ATRHFTTCRF  480
TFNIHVIQIN PQXHLKGWNX REHVQLXRTG SPRWKASGSP FRKPLFSQSK TSEARIGNSG  540
KTLEQADDLH LRMGDPKATS LLSLAPGCRF YPSEEQLLCY YLSXKNAAEA GKSGGYDLIR  600
ELDLYGHDPF DLPESACYSY GXGGRKRHWF CYTVRILKKR RAKSGYWRRQ GRVRDVVGRG  660
GTAAFVLCRI LVRSRSGNRI SDHGLSSYAE QSACTVRHIG IQHDGFHTPS SSENEVHGDT  720
SVPRKNEMSK YPRLDPELDD RVMTRPVSIS RIQSNEQVPA SVLGGRNPIL LDNLXAKHLH  780
SIMEGDFIEL DDLID
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1624640RKRHWFCYTVRILKKRR
2637642KKRRAK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF1981181e-148KF198118.1 Malus hupehensis NAC domain protein (NAC41) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008347613.20.0uncharacterized acetyltransferase At3g50280-like
TrEMBLM5XGM40.0M5XGM4_PRUPE; Uncharacterized protein
STRINGXP_008378022.10.0(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.27e-11NAC family protein