PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000300820
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 508aa    MW: 55523.3 Da    PI: 6.2684
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000300820genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.4e-10387445563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +   l+  +  l+se+
  MDP0000300820 387 KRAKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLYAQFTLLQRDSMGLTSEN 445
                    9****************************************999999988888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-16383447IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.45385448IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.82E-11387438No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-8387456No hitNo description
PfamPF001701.7E-8387445IPR004827Basic-leucine zipper domain
CDDcd147031.59E-22388437No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    Send to blast
MEGSDETGSA KQQRPNPAFG SSSFLVPKPN SNLDIPNFNP SQMGFRMSPE SSKRPGIPPS  60
HPNNHNSMPF SRPQSGSWQM GQQNLSSGSS HTRSMSQPPF FSLDSLPPLS PLTYREPSPP  120
SLSDPNSVDV SMGESVVNSH GPSLRSPVND STAYWAGDGR PPRRGHRRSN SDVSLGLSAI  180
SQPSPQLIPA GRRTSLDESA SGKPVQLMRQ GSNGNAEGMD ERKSGGEVVD DLFNAYMNLE  240
NIDQMNLSGN EDKDMDSRAS GSKTNGGESS DNEVESGLNG NRNGMLRPAS GLPNERREGL  300
KRTASGDVVP NARHCRSISM DSYMDNLNFD DEPLKPLPVG QQSPSTSLDG NSAKFSMEFG  360
SGEFNAIELR KIMENDKLAE IALSDPKRAK RILANRQSAA RSKERKMRYI VELEHKVQTL  420
QTEATTLYAQ FTLLQRDSMG LTSENNELKF RLQSLEQQAQ LKDALNEALT GEVQRLKLAA  480
AELGGESHLS NHTQQNAQPQ QFMQPQQN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.126650.0leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008377166.20.0transcription factor VIP1-like
TrEMBLA0A498J7G70.0A0A498J7G7_MALDO; Uncharacterized protein
STRINGXP_008364941.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-106bZIP family protein