PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000301320

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

BES1

Protein Properties

Length: 110aa MW: 12088.6 Da PI: 9.6795

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000301320	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	98.7	1.2e-30	5	102	3	101
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 sg +++ E+E++k RER+RRai++ki+ LR++ +y+l r D+neVl+ L++eAGw+ve+D ttyr p a g+ + ++p + ++ ++ MDP0000301320 5 SGSGRSESEKEKTKIRERQRRAITTKIFHSLRKHRGYRLFPRGDINEVLRHLATEAGWLVEPDDTTYRPPNAPS-CYPACGTPKATTPVATSTPTP 99 666678899***********************************************************777777.555555555555555544455 PP DUF822 99 kss 101 +ss MDP0000301320 100 SSS 102 444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.7E-27	8	97	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence Send to blast
MAGTSGSGRS ESEKEKTKIR ERQRRAITTK IFHSLRKHRG YRLFPRGDIN EVLRHLATEA 60 GWLVEPDDTT YRPPNAPSCY PACGTPKATT PVATSTPTPS SSMVIEGGEC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009344419.1	2e-56	PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like
Swissprot	O80831	2e-16	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A498HK27	8e-75	A0A498HK27_MALDO; Uncharacterized protein
STRING	XP_008389172.1	4e-70	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13979	16	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	3e-14	beta-amylase 2

Link Out ? help Back to Top
Phytozome	MDP0000301320

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]