PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000303924
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 133aa    MW: 15129.2 Da    PI: 6.8041
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000303924genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like54.23.2e-17981321751
        G2-like  17 aveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                    a++qLGGs+ AtPk+i+elmkv+gLt+++vk HLQ
  MDP0000303924  98 ALQQLGGSHAATPKQIRELMKVDGLTNDEVKNHLQ 132
                    89********************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.0E-1298132IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-1398133IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MTLQLWGPKS ALKGLSTLRV ENYNFXNKFX NWLPVASRGH EIMAXYVQEY SSYVGFMRDG  60
AQWFVENTDI KLVGNDDPLQ GEIXWNRTPR ELGISAYALQ QLGGSHAATP KQIRELMKVD  120
GLTNDEVKNH LQV
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.256738e-48leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028954027.11e-47cyclase-like protein 2
RefseqXP_028966249.12e-47transcription factor NIGT1-like isoform X1
RefseqXP_028966250.12e-47transcription factor NIGT1-like isoform X1
RefseqXP_028966251.11e-47transcription factor NIGT1-like isoform X2
TrEMBLA0A498JTI31e-50A0A498JTI3_MALDO; Uncharacterized protein
STRINGXP_008383967.17e-47(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.11e-16G2-like family protein