PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000307020
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 496aa    MW: 56002.6 Da    PI: 4.7466
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000307020genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM484e-15782212128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknratk.s 80 
                     pGfrF+Ptd+elv  +L+  + +++      + +++++++++  +k++P+++ +        ++ a+++  +yfFs+ +k +++g++  r++   
  MDP0000307020  78 RPGFRFKPTDQELVGGFLHYFLVKTPrllppPPHSTFMHKCNLfgNKFQPSQIWEafggxaalQLGATDQpALYFFSELKKITPKGSKLDRKMGlG 173
                    59****************99998888898875555679***9833589*****74478888664444444488******************66559 PP

            NAM  81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    g+W+ +     v  +  +++ +glk+t+ + +  + +  +  W ++ey+l
  MDP0000307020 174 GTWEGKSVPAWVEGTegNSSCIGLKRTFWYKN--EGTEDHGGWKLDEYSL 221
                    9***88888888776556666*******9973..3333589*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-1772245IPR003441NAC domain
PROSITE profilePS5100521.70377246IPR003441NAC domain
PfamPF023659.9E-1279221IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    Send to blast
MPETQAMYAT TDQQCTHMYL QCKLAIVQEI AFYKYPNNAL SNRHIKIHSN RSTNLLHYST  60
PLFFFCVVXL MENHSLFRPG FRFKPTDQEL VGGFLHYFLV KTPRLLPPPP HSTFMHKCNL  120
FGNKFQPSQI WEAFGGXAAL QLGATDQPAL YFFSELKKIT PKGSKLDRKM GLGGTWEGKS  180
VPAWVEGTEG NSSCIGLKRT FWYKNEGTED HGGWKLDEYS LFASPRKRNS HTSYDFDFVL  240
CRLRNTSGIN KRKCSTSSSQ DEEVPKMKKK RANEEIEQNM HAINVVDEEG RQGNSCLTSN  300
FVISDQENNE FAVGDYVDYG YDDNDPRFTI TADELDDVLA KEPTNGGAVE ARFPTASASE  360
ELLLGKERKD VQLPVSSVVA DGGEDQALYT NMSGEFIPET RELPLPASSG TAEDGTVEEK  420
AWDPSLLEQY WLSEAQEAEP LNPSLYRDFM FADGXGVEEA YHPSAFDNVV DQSLFGSSYL  480
NSYLFTEDQF MPHXLM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250270KRKCSTSSSQDEEVPKMKKKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028956331.10.0NAC domain-containing protein 102-like
TrEMBLA0A498KEC10.0A0A498KEC1_MALDO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2762723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.19e-08NAC family protein