PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000312944

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

G2-like

Protein Properties

Length: 327aa MW: 36635.2 Da PI: 9.2655

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000312944	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.1	1.1e-29	97	148	2	53
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 prlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vkgL ++hvkSHLQ + MDP0000312944 97 PRLRWTPDLHRCFVHAVERLGGEQRATPKMVLQIMNVKGLNISHVKSHLQVF 148 8************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.9E-28	93	157	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.05E-13	95	149	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-21	97	148	IPR006447	Myb domain, plants
Pfam	PF00249	1.7E-5	98	146	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MERIEGDDHH HQSSSFLKRS PCSSVDNGDQ KPHTSSFDDG DGVTPNRSTA QGKHLVVHGY 60 HHHFPAAAGH RQMIGSLLKS SPSSSTPVRP YVRSRMPRLR WTPDLHRCFV HAVERLGGEQ 120 RATPKMVLQI MNVKGLNISH VKSHLQVFDY GQMYRSMKHE QGIQAAALAA KKNGMLQVSE 180 YSNNSNFLKP IDIAQPVYHQ KKDLMKKMYN HRPCQSNETC YIEGLDRNTS PLAKWKDETK 240 PLVLPYQAPS SFIVDNDLLK RCTDNIGQES NHKELEDLGS TKSEYDARMS LSVNASSSKA 300 SRELLRFSKA AGNSDANDVS LELTLGT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	3e-16	98	148	4	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	3e-16	98	148	4	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	3e-16	98	148	3	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-16	98	148	3	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-16	98	148	3	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-16	98	148	3	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	3e-16	98	148	4	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	3e-16	98	148	4	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	3e-16	98	148	4	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	3e-16	98	148	4	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	3e-16	98	148	4	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	3e-16	98	148	4	54	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028964811.1	0.0	uncharacterized protein LOC103446871 isoform X1
TrEMBL	A0A498IWS4	0.0	A0A498IWS4_MALDO; Uncharacterized protein
STRING	XP_008384248.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9381	28	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-25	G2-like family protein

Link Out ? help Back to Top
Phytozome	MDP0000312944