PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000315947
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 405aa    MW: 46517.4 Da    PI: 6.1398
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000315947genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.81.8e-091713818128
            NAM  18 yLkkkvegkk....leleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgk..rknratksgyWkatgkdkevlsk.kgelvg 101
                    yL+++ ++ +    ++ e+vi+e+d+y + e +d  +    +  ++++++yfF+k + ++a+g   r   ++ s +Wk   + ++v +  +g+++g
  MDP0000315947  17 YLHQESSSWNrgvpFRDEHVIPEIDLYGSmEARDXWNnnggQNLEKDEDLYFFTKLKPASAKGAgsRIACTIGSXTWKGENSGTKVEDXkTGKTIG 112
                    66665554444544566678999999865355555322333333467799*****999988765115555677899**9999999988768899** PP

            NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                      k + +  +++ + e+  W+mhe++l
  MDP0000315947 113 FLKRFQYR-NTKFRQESXCWIMHEFSL 138
                    ******97.5566668999******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.321167IPR003441NAC domain
SuperFamilySSF1019413.4E-1228166IPR003441NAC domain
PfamPF023655.0E-656138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MPPASEWSRF MRLGKRYLHQ ESSSWNRGVP FRDEHVIPEI DLYGSMEARD XWNNNGGQNL  60
EKDEDLYFFT KLKPASAKGA GSRIACTIGS XTWKGENSGT KVEDXKTGKT IGFLKRFQYR  120
NTKFRQESXC WIMHEFSLDP KLVKHIKSSS TSRQNNDEYV VCRIRKNXDR KRKADDRDHD  180
REEARVVQSN RNKIQRLSEN IDESYVAPMS SEVNVDHYNQ QQQQQQQTNI NATSTSSSIA  240
VTNVDQPQYS YHEPAQYYEV INQYDIPLQQ EQTTTTIDHA NVTNLPTGLT EQQRYFVTQD  300
RTVASSSLAM PDNQQQQMHL PQYYHDXQEP MTPMTAMARP YDFIAEAACL SQPNSIADPT  360
MASSLGMARQ XDYLQHNGFV NNASTDTPQY YYSSTQDPSS GTDSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008385925.11e-84NAC domain-containing protein 41-like
TrEMBLA0A498KDB00.0A0A498KDB0_MALDO; Uncharacterized protein
STRINGXP_009372720.11e-142(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-07NAC domain containing protein 38