PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000319736
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 239aa    MW: 25899.1 Da    PI: 7.1266
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000319736genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-173787155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +++kGVr ++ +g+Wv eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  MDP0000319736 37 KKFKGVRMRS-WGSWVTEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 87
                   59*****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512576134No hitNo description
CDDcd000182.64E-173797No hitNo description
SMARTSM003801.4E-3338101IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-183896IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-293896IPR001471AP2/ERF domain
PfamPF008474.3E-113887IPR001471AP2/ERF domain
PROSITE profilePS5103221.3113895IPR001471AP2/ERF domain
PRINTSPR003671.8E-83950IPR001471AP2/ERF domain
PRINTSPR003671.8E-86177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MVKTDQRIIQ LPSEMTSSKT TSKSPPSSSS TSACKKKKFK GVRMRSWGSW VTEIRAPNQK  60
TRIWLGSYST AEAAARAYDA ALLCLKGSSA NLNFPTTASS HFIPQEMTVM SPKSIQRVAA  120
AAANNNAATT TANIACPPSP PPQSSSSSLV SSPSLVSSPS MSSSPSINLI DDDMSSLMGS  180
FGGSYTPTYY DQANDQLPMS SMDSWNNFDQ MFDGALLDPQ PPMMYDFYEE SDIRLWSFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-1435100268ATERF1
3gcc_A2e-1435100268ATERF1
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed cotyledons, ovules and seeds of immature siliques. {ECO:0000269|PubMed:21069430}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008388243.21e-116ethylene-responsive transcription factor ERF014
SwissprotQ9SFE42e-49ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLA0A498J8991e-173A0A498J899_MALDO; Uncharacterized protein
STRINGXP_008388243.11e-174(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-33ERF family protein
Publications ? help Back to Top
  1. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  2. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]