PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000320322
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 542aa    MW: 60555.2 Da    PI: 7.3032
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000320322genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.9e-11249289545
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                    k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  MDP0000320322 249 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQEL 289
                    7789************************8766666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-8242291No hitNo description
SMARTSM003386.4E-9245317IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243247291IPR004827Basic-leucine zipper domain
PfamPF001702.7E-8249289IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.81E-7249291No hitNo description
PROSITE patternPS000360252267IPR004827Basic-leucine zipper domain
PfamPF141442.7E-31340413IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MGFSRGFDFG GRGGQEEENK RDHQLLETKL LXSSARPTST SSSFLMASSI QGNSNQLEHQ  60
QQHHHQIQDQ HHHHHQQQQQ QIQYGMMQSS SANIPAGNFI SNKDGGAAYD LGELDQALFL  120
YLDGQSQDHH NPSANHVHHQ DQRHLHQNNS SSGMRPPTLN IFPSQPMHVE PSSSTKAAGT  180
GLVSPSSSGS KRPSEPSMEL ANARNDSTAP PPPSGPSHEP AKAIKREGNR KGPTTSSSEQ  240
EGPKTPDPKT LRRLAQNREA ARKSRLRKKA YVQQLETSRI KLTQLEQELQ RARSQGMFFG  300
GGXVGGEQQS LPVGINNTSS DAAVFDMEYA RWLEEHHRLM CELRAAVQEH LPENELRLYV  360
DNCLAHYDEV LNLKGMVAKT DVFHIVSGMW KTPAERCFMW MGGFRPSEVI KIILNQIEPL  420
TEQQLLGICG LQQSTQETEE ALSQGLEALN QSLSETITSD SLSCPPNMAN YMGQMAIAMN  480
KLSTLEGFVR QADNLRQQTI YRLQQILTTR QAARCLLAIA EYFHRLRALS SLWMGRPRQD  540
QS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.130460.0bud
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008367369.20.0bZIP transcription factor TGA10-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A498HYB50.0A0A498HYB5_MALDO; Uncharacterized protein
STRINGXP_008367369.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein