PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000344348
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family BES1
Protein Properties Length: 332aa    MW: 35478 Da    PI: 8.3799
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000344348genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822225.88.6e-7031541150
         DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                    ++++r+ptwkErEnnk+RERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++++++g s+sasp+ss+q 
  MDP0000344348   3 TSGTRMPTWKERENNKKRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVDRMDIMGGSTSASPCSSYQP 98 
                    5899******************************************************************************************** PP

         DUF822  97 slkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                    s+ +s+ +sp +sy++sp+sssfpsp+++  +++  a  +sl+p+l++ls+ sss+
  MDP0000344348  99 SPCASYNPSPGASYNPSPASSSFPSPARYHANENGXAdaNSLIPWLKTLSSGSSSA 154
                    ***************************998876654455**********9977765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.3E-684148IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MMTSGTRMPT WKERENNKKR ERRRRAIAAK IYSGLRMYGN YKLPKHCDNN EVLKALCNEA  60
GWTVEEDGTT YRKGCKPVDR MDIMGGSTSA SPCSSYQPSP CASYNPSPGA SYNPSPASSS  120
FPSPARYHAN ENGXADANSL IPWLKTLSSG SSSATSKLPQ FFVQGGSISA PVTPPLSSPT  180
CRTPRTKSDW DEAVAGSSWA GQHYPFLPSS TPPSPGRQGL PDSGWLAGLQ IPQSGPSSPT  240
FSLVSKNPFN LKEALSGAGS RMWTPGQSGT CSPAVAASID HTGDIPMSDG MAAEFAFGSN  300
TTGLVKPWEG ERIEECVSDD LELTLGSTRT RX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-24778372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-24778372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-24778372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-24778372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.62430.0fruit| leaf| stem
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008383594.20.0BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-126BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A498IT000.0A0A498IT00_MALDO; Uncharacterized protein
STRINGXP_008383594.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-111BES1/BZR1 homolog 4