PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000397753
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family FAR1
Protein Properties Length: 234aa    MW: 26484.4 Da    PI: 7.1396
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000397753genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.57.4e-07741273890
           FAR1  38 egkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                    egk++ + + + +++  r  +rt+Ckakl+v+k    + ++vt +++e nH+++
  MDP0000397753  74 EGKKRVDPNPKPNKKGMRGDDRTECKAKLVVNKGIgCEIFVVTVFNEEFNHPMS 127
                    5666655555667888999**************99899*************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MASESIEKRV EGWVPGFRDP RDHIRVVIAE KERQREGGGE GCQSELDLMW VEVVLMLELT  60
MVVHPEAMKN RDCEGKKRVD PNPKPNKKGM RGDDRTECKA KLVVNKGIGC EIFVVTVFNE  120
EFNHPMSSAS YLFRSHCRVS KVKNAMIEQC AQDNISVSKQ VGLLEVPSEG IGNIGCTPKD  180
MYNAKQQLRG HLIGHNAEML KKHFEDEKKI NNSFYIKMEI DEGGTLEFLL SRY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-