PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000407755
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 203aa    MW: 23310.7 Da    PI: 5.8802
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000407755genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.8e-1587140558
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                    +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L ++l++ ++  +k
  MDP0000407755  87 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLVDKLNHVSESHDK 140
                    689******************************************999887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-1483147IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.69185148IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-1487137No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-1287160No hitNo description
PfamPF001702.7E-1387140IPR004827Basic-leucine zipper domain
CDDcd147029.05E-1988139No hitNo description
PROSITE patternPS00036090105IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MQPGEVTGLH YLAPLSSSSP YPPHFSMSTQ SNATAFQFNR FSSPLYNFQF PNSQLQEINN  60
NPQQPSSFSS STSDEADEQQ LSLINERKQR RMISNRESAR RSRMRKQKHL DELWSQVVWL  120
RNENHQLVDK LNHVSESHDK VLEENAQLKE EASELRQMVN DLQLHSPYNP FLRDLEDVPC  180
NTAYLRTESS NPSITSSMDL LG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199106RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00647PBMTransfer from LOC_Os02g49560Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008379475.11e-147basic leucine zipper 43-like
SwissprotQ9FMC21e-43BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A498J7F11e-146A0A498J7F1_MALDO; Uncharacterized protein
STRINGXP_008379475.11e-146(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.15e-51basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]