PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000457509
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 183aa    MW: 20062.2 Da    PI: 10.6569
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000457509genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.31.4e-214696155
            AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g
  MDP0000457509 46 PHFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAALSLRG 96
                   689*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.68E-3046103No hitNo description
PfamPF008471.3E-144696IPR001471AP2/ERF domain
PROSITE profilePS5103222.70847104IPR001471AP2/ERF domain
SMARTSM003801.0E-3447110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-3147104IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-2247104IPR016177DNA-binding domain
PRINTSPR003672.2E-104859IPR001471AP2/ERF domain
PRINTSPR003672.2E-107086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MSTVDALHLR DTALSLAVEP PSPPPGIPRP QPKHGAPAKA GAGKDPHFRG VRKRPWGRFA  60
AEIRDPWKKT RKWLGTFDTA EEAARAYDEA ALSLRGPKAK TNFGNLALVP PHSLLLGGGS  120
EMFWPPPPMY FMSGAPAVAP IRSEYTGYKL EKVDAVRGQE EKKMRKNKKP FLFDLNLPAP  180
LF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-20481191580Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008382937.11e-129ethylene-responsive transcription factor 8-like
TrEMBLA0A498IYX01e-128A0A498IYX0_MALDO; Uncharacterized protein
STRINGXP_008382937.11e-128(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-21ethylene responsive element binding factor 3