PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000529388

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

BES1

Protein Properties

Length: 125aa MW: 13721.9 Da PI: 10.2952

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000529388	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	90.1	5.4e-28	33	96	2	65
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedD 65 +sg ++++ E+E++k RER+RRai++ki+ GLR++ +y+l r D+neVl L++eAGw+ve++ MDP0000529388 33 TSGSRRSESEKEKTKMRERQRRAITTKIFHGLRKHXGYRLSSRGDINEVLXHLATEAGWLVEPG 96 68889999******************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.3E-23	35	96	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence Send to blast
MSAGLAMSQS DDGDNKEQKK KWRSGEREEI AGTSGSRRSE SEKEKTKMRE RQRRAITTKI 60 FHGLRKHXGY RLSSRGDINE VLXHLATEAG WLVEPGAPNC CPACGTPKTT TPVATTTPTP 120 SRAW*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009344419.1	7e-44	PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like
Swissprot	O80831	6e-17	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A498HK27	2e-46	A0A498HK27_MALDO; Uncharacterized protein
STRING	XP_008389172.1	6e-47	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13979	16	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	6e-11	beta-amylase 7

Link Out ? help Back to Top
Phytozome	MDP0000529388

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]