PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000536881
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 451aa    MW: 49693.7 Da    PI: 7.8525
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000536881genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.4e-10165205545
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                    k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  MDP0000536881 165 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 205
                    788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.2E-10161224IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415163207IPR004827Basic-leucine zipper domain
PfamPF001707.5E-7165205IPR004827Basic-leucine zipper domain
CDDcd147084.29E-22165217No hitNo description
SuperFamilySSF579596.88E-7165208No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-7166209No hitNo description
PROSITE patternPS000360168183IPR004827Basic-leucine zipper domain
PfamPF141444.2E-32247322IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MGSRRVKVGA NDGNKVVTEM PSFVPPVPTP NPSVTEGSSI RSSQVSDFGI LEQTLGFRIE  60
DAVDIGRSAM FNHNKLSSPA VGSSDAQFGA LNKLIPLQKE PQPLSVSRSN HENWGESNMA  120
DGSPRTDTST DDTEDKNQRI EGNQITGLLA SDSSDRSKEK PGDQKTLRRL AQNREAARKS  180
RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QGIFISSSGD QSHSMSGNGA LAFDVEYARW  240
LEEHNRQINE LRAAVNSHAG DTELRTVIDN VIAHYDDIFR IKGTAAKADV FHILSGMWKT  300
PAERCFMWIG GFRSSELLKL LVNQLEPLTE QQLVGIYNLQ QSSQQAEDAL SQGMEALQQS  360
LAETLASGSP APSGSSGNVA NYMGQMAMAM GKLGTLEGFL HQADNLRQQT LQQMHRILTT  420
RQSARALLAI NDYFSRLRAL SSLWLARPRE *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.23830.0bud| flower| fruit| leaf
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028948509.10.0transcription factor HBP-1b(c38)-like isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A498I4J70.0A0A498I4J7_MALDO; Uncharacterized protein
STRINGEMJ050740.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-147TGACG motif-binding factor 6