PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000565848
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family Trihelix
Protein Properties Length: 365aa    MW: 42843.6 Da    PI: 4.5497
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000565848genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix445.6e-14121206186
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    +Wt++ v  L+e+  ++  +l+r++l+  +W ev+ k+ ++ ++er+ +qCk+ ++ l+++ykk+ke +++    +ss+++yf+++e
  MDP0000565848 121 EWTEHAVFMLLEVWGDRFLQLGRKSLRSDDWNEVAYKVsEASKIERTETQCKSMLDMLKRKYKKEKEKMEEM-GLNSSKWAYFKKME 206
                    5*************************************677899**************************96.89999********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.7E-18120207No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MDDMEDDPRY HPKSYSANHH NSSGRRKIHT RNTQYSRPVP NRXAEDDDDE LDDFDEGNGR  60
EDQYNDEDDE HRHGFNRNFD AEEDFERHPK KRKVKNLESR YEFAPRVRLP NREPGFRAEE  120
EWTEHAVFML LEVWGDRFLQ LGRKSLRSDD WNEVAYKVSE ASKIERTETQ CKSMLDMLKR  180
KYKKEKEKME EMGLNSSKWA YFKKMEMLMA ASSRQETGLA CGVDSGEYVF MNTRVYLERS  240
NGFDEMRDSP GESETDDDGD ENGNDDFDVF PPRMAGMRGG DGDEGSSYRV LADSIHKFGE  300
IYEKIESSKR QQMRELEKMR KNFNKELELQ KKQILERAQV EIAKIQEADD DDDETDVSVD  360
DLSE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178186KRKYKKEKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009347160.10.0PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A498KEU20.0A0A498KEU2_MALDO; Uncharacterized protein
STRINGXP_008386670.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.18e-82Trihelix family protein