PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000634006
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 147aa    MW: 16194 Da    PI: 4.312
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000634006genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.97.8e-102471159
            NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewy 59
                   deelv +yL +k++g+++el e+i+evd+yk+e +dLp  ++   ++ +
  MDP0000634006  2 DEELVAYYLDRKINGRTIEL-EIIPEVDLYKCETRDLPGIIEL--QHRF 47
                   9*******************.99***************64433..2222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.12E-8243IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MDEELVAYYL DRKINGRTIE LEIIPEVDLY KCETRDLPGI IELQHRFXIH KHNALSTTRW  60
FSDIPQTSSP EANSVERLVS IHSDGPEANS VEGHVVVHGD GPKANLVEGP VVPTDVSEAN  120
VVIEVYVVPA DGLDAKAIEE GFLLMF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498IF193e-90A0A498IF19_MALDO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.17e-17NAC domain containing protein 28