PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000640510

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

ZF-HD

Protein Properties

Length: 125aa MW: 13731.8 Da PI: 5.3305

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000640510	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	38.7	2.3e-12	71	105	7	42
ZF-HD_dimer 7 keClkNhAaslGghavDGCgEfmpsegeegtaaalk 42 +eClkNh a++G +a+DGCgE mp+ geegt++ lk MDP0000640510 71 EECLKNHTAAIGETATDGCGESMPN-GEEGTIEDLK 105 69**********************8.9999988776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51523	13.94	70	124	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	6.1E-11	71	105	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	5.0E-9	72	105	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence Send to blast
MLVEALVQAV TEQVVSAVVQ EARFVFKFKN ELEQMEKWLG KMRCLVVDAD KKLKLSSDQE 60 TVKKYLSEPR EECLKNHTAA IGETATDGCG ESMPNGEEGT IEDLKGLTLS VRKSDVGAKQ 120 GKKQ*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008384150.1	4e-35	disease resistance RPP13-like protein 4
Refseq	XP_017190782.1	4e-35	disease resistance RPP13-like protein 4
TrEMBL	A0A498IV92	3e-35	A0A498IV92_MALDO; Uncharacterized protein
STRING	XP_008384150.1	1e-34	(Malus domestica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14440.2	1e-11	homeobox protein 31

Link Out ? help Back to Top
Phytozome	MDP0000640510