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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000662303 |
| Common Name | SPMdDELLA3b |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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| Family |
GRAS |
| Protein Properties |
Length: 548aa MW: 59991.7 Da PI: 5.696 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000662303 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 427.9 | 8.3e-131 | 157 | 521 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
lv+lL++cAe v+ gdl+la +l+++++ l + + + ++a yf AL+ r+++ + ++ +++ ++ e+ +++f+e++P+lkf+
MDP0000662303 157 LVHLLVTCAESVQRGDLALAGSLIENMQALltRVNPSCGIGKVAGYFIDALSCRIFS--P------QTVGSASGSVHENELLYHYFYEACPYLKFA 244
68***************************95434444789****************9..3......333334445778888999************ PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
h+taNqaIlea++g+++vH+iDf++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++v+f f+ ++a+rled++
MDP0000662303 245 HFTANQAILEAFDGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNVRFXFRGVAASRLEDVK 340
************************************************************************************************ PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
+++L+v+p+Ea+aVn+++qlhrll ++ + +s+++ +L+ +++l+Pk+v vveqeadhn++ Fl+rf+eal+yys +fdslea + + ++ +
MDP0000662303 341 PWMLQVSPKEAVAVNSIMQLHRLLGSDPNRNSPIEMMLSWIRNLNPKIVAVVEQEADHNKPGFLDRFTEALYYYSNMFDSLEAC---AMQPEKALA 433
*********************************************************************************999...467777788 PP
GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ +++rei+nvv+cega+r+erhe l kWr rle+aGF+p++l+++a kqa++ll ++ +gyrvee++g+l+lgW++rpL+++SaW+
MDP0000662303 434 EIYIQREICNVVCCEGAARVERHEPLDKWRIRLEQAGFRPLHLGSNAFKQASMLLTLFSAEGYRVEENQGCLTLGWHNRPLIAASAWQ 521
888************************************************************************************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 548 aa
Download sequence Send
to blast |
MGPYGSTTCS GASSSASSSS SSSVTKPPAD IDGCLADAGY KVRSSDLRHV AQRLERLETV 60
MVNSPGDLSH LASDAVLYNP ADLATWVDSL LTEFNHQPLI SLPSDLDFSE GAVINNPAAL 120
PRQTWTDNSA VIAAVPQQNH NQLTVVTAME EDSGIRLVHL LVTCAESVQR GDLALAGSLI 180
ENMQALLTRV NPSCGIGKVA GYFIDALSCR IFSPQTVGSA SGSVHENELL YHYFYEACPY 240
LKFAHFTANQ AILEAFDGHD CVHVIDFNLM HGLQWPALIQ ALALRPGGPP LLRLTGIGPP 300
SPDGRDSLRE IGLRLAELAR SVNVRFXFRG VAASRLEDVK PWMLQVSPKE AVAVNSIMQL 360
HRLLGSDPNR NSPIEMMLSW IRNLNPKIVA VVEQEADHNK PGFLDRFTEA LYYYSNMFDS 420
LEACAMQPEK ALAEIYIQRE ICNVVCCEGA ARVERHEPLD KWRIRLEQAG FRPLHLGSNA 480
FKQASMLLTL FSAEGYRVEE NQGCLTLGWH NRPLIAASAW QVMPMAEATA NQQXVGIINQ 540
NNNPNRI*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ007887 | 0.0 | DQ007887.1 Malus x domestica DELLA protein (L3a) mRNA, partial cds. |
