PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000667743
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 335aa    MW: 38552.6 Da    PI: 6.0204
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000667743genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.84.6e-1921319128
            NAM   9 PtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.........kvkaeekewyfFskrdkkyatgkrknra..tksgyWkatgkdkev 92 
                    P+d+el+  yL++k++g++ +   +++++d+y + eP+d+ +         +  +++k++y F++ ++k+++g+r  r+  t+ g+Wk     k +
  MDP0000667743   2 PRDDELLLGYLRPKLDGQDYPK-GIVHDCDLYGLeEPSDIWRrlnrashdgQECTDDKDIYVFTTLNSKAPNGSRVCRTvgTTGGTWKGEDAGKXI 96 
                    9******************999.89*******9978****64356665554222377899******************645779************ PP

            NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +++  ++++glkk  ++   ++ ++++ +W+mhe++l
  MDP0000667743  97 YASgIKHAIGLKKRYTYR--NKGSSQNDHWIMHEFHL 131
                    *9855677******9998..45555799********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.1781170IPR003441NAC domain
PfamPF023654.7E-122131IPR003441NAC domain
SuperFamilySSF1019411.44E-222168IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MPRDDELLLG YLRPKLDGQD YPKGIVHDCD LYGLEEPSDI WRRLNRASHD GQECTDDKDI  60
YVFTTLNSKA PNGSRVCRTV GTTGGTWKGE DAGKXIYASG IKHAIGLKKR YTYRNKGSSQ  120
NDHWIMHEFH LDPSLLRNKH HQDIGIYINK RKRDSRMQEK NTVLCILRRK DDISKKRKLE  180
ERDNYEENAA NHFQPQALNA LTVEDYNNAT SYMEQNAFDH FQPQALTATM IGDYSTDPRY  240
TEENAANHFQ PQGLYAATTG DYSNAHWYTE ENAANHFQPQ EHYAATTGDY SNAHWYTEQN  300
AADHFEPHDE AHXATNEDLT TALRRMEEIL MXGF*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008361191.20.0NAC domain-containing protein 83-like
TrEMBLA0A498KBK10.0A0A498KBK1_MALDO; Uncharacterized protein
STRINGXP_008361191.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.12e-12NAC domain containing protein 86