PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000670737
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family Trihelix
Protein Properties Length: 83aa    MW: 9579.87 Da    PI: 8.4847
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000670737genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.29.9e-092868141
       trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrer 41
                   +Wt++e  +Li a++e++++lrr++lk  +Wee +  m++r
  MDP0000670737 28 QWTQEEMVQLIWAYEEKWHALRRAQLKLSQWEEMAMSMAAR 68
                   7***********************************99654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
MSSPPQSSPM ASVSASSRTS AKKPQPLQWT QEEMVQLIWA YEEKWHALRR AQLKLSQWEE  60
MAMSMAARCD YEYREPSKFT TH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009372525.15e-31PREDICTED: uncharacterized protein LOC103961670
TrEMBLA0A498IXM84e-24A0A498IXM8_MALDO; Uncharacterized protein
STRINGXP_009372525.12e-30(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF100872835
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.13e-11Trihelix family protein