PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000693024
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 330aa    MW: 37054.5 Da    PI: 5.4448
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000693024genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.34.2e-08218958128
            NAM  58 wyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++fF + ++++ +++r++r + + g+W++t +dk +   +g  +g k  + + k+ ++  ++  W+++ey+l
  MDP0000693024  21 LFFFYELRSRSDSDSRSKRqIEAGGTWSETSSDKVLGL-DGIPIGDKGHFRYNKKGSK--NNGGWLLEEYSL 89 
                    68888888888889999995566899******998888.9************954333..478*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.2591107IPR003441NAC domain
SuperFamilySSF1019411.01E-144104IPR003441NAC domain
PfamPF023657.5E-6989IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MEVGYYGMPL GFRFHPTDQD LFFFYELRSR SDSDSRSKRQ IEAGGTWSET SSDKVLGLDG  60
IPIGDKGHFR YNKKGSKNNG GWLLEEYSLL PNVVAGPKVV LSRLKRNPRS RCGNKMNSSS  120
PTHDFNEKPP IKRARKEVSX EKPLIKRKXA RKEPGSQKHS NVNVITNTPA VVPFVGTESN  180
MITDTRYQDQ ECITNINGNA KPTDFSDQDS VILMSDVPSY PICLDGXXXN HDXGCISYIN  240
GNVMPIRTHI SDHEYVPLMS DVPSSPVFLG GEEYXLDGEA VRGDIKEXLT TLEGKLPQEW  300
PQIDEFSQPL DGFNYWTDCL WMSDSVNDQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028956589.10.0uncharacterized protein LOC103419193
TrEMBLA0A498K0F40.0A0A498K0F4_MALDO; Uncharacterized protein
STRINGXP_009344383.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634