PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000717044

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

SAP

Protein Properties

Length: 131aa MW: 13699.8 Da PI: 10.7117

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000717044	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	89	6e-28	13	99	2	84
SAP 2 ssssssssseseegseggeggdass....gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwr 84 ssssss s++++g++g +g + s g+++gpsssr+ra+nevwpePf+eala+qva++asr +Grlaaa+alanvfq + r MDP0000717044 13 SSSSSSPTSHDGNGDDGANGAGPSHvqrgGDFQGPSSSRRRAVNEVWPEPFVEALASQVATEASRAVGRLAAAPALANVFQHETITR 99 334444444555555555555444388999**************************************************9876554 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence Send to blast
MSTSYSSAPS STSSSSSSPT SHDGNGDDGA NGAGPSHVQR GGDFQGPSSS RRRAVNEVWP 60 EPFVEALASQ VATEASRAVG RLAAAPALAN VFQHETITRE HVHDQVSKSK KKXKKIRKGK 120 EDPIRAGKRA *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028953353.1	1e-54	transcriptional regulator STERILE APETALA-like
TrEMBL	A0A498H913	3e-53	A0A498H913_MALDO; Uncharacterized protein
STRING	XP_009343485.1	8e-39	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7687	31	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	1e-08	SAP family protein

Link Out ? help Back to Top
Phytozome	MDP0000717044