PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000718993
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 159aa    MW: 17668.4 Da    PI: 4.387
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000718993genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM22.62.9e-072421152
            NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvk 52
                   dee v +yL +k++g+++el e+i+evd+yk+e +d p  ++
  MDP0000718993  2 DEEXVAYYLDRKINGRTIEL-EIIPEVDLYKCEXRDXPGIIE 42
                   9*******************.99**********999885432 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.55E-6241IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MDEEXVAYYL DRKINGRTIE LEIIPEVDLY KCEXRDXPGI IELQHRFXIH KHNALSTTRW  60
FSDIPQTSSP EANSVEXLVS IHSDGPEANS VEGHVVVHGD GPKANLVEGP VVPTDVXEAN  120
VVXEVYVVPA DGLDAKAIEE GFLLMFXKQT PLRACXSCX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498IF192e-84A0A498IF19_MALDO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.15e-15NAC domain containing protein 28