PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000725651
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 299aa    MW: 34013.7 Da    PI: 6.5105
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000725651genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.77.3e-131152683128
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................................kvkaeekewyfFskrdk 66 
                     G+ F+P d  l++++L++k+ ++ l +  +++e+d y  +P++L                                  ++ a  +  yfF++++ 
  MDP0000725651 115 LGYTFNPDDGILLHHHLREKCLENALGFYAILEEADXYAKHPQNLIGlflsefififsknwvplsvfgrltatdvtenyRALAAGNVGYFFTRSRP 210
                    69**************************999**************8457999****************9998876654422234455599999888 PP

            NAM  67 kyat.gkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    + ++  + ++   +++g W   gk+ +vl+ +ge+vg+k+ L +       g kt   + eyrl
  MDP0000725651 211 NXTQpXTSTSTdHVQAGHWI-FGKELDVLH-QGEKVGVKQLLEYC----AAGAKTGYKIIEYRL 268
                    7765233333336789***8.8999****9.999**********9....567899999999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.15E-5113171IPR003441NAC domain
PROSITE profilePS5100513.601113288IPR003441NAC domain
PfamPF023656.8E-8116268IPR003441NAC domain
SuperFamilySSF1019415.36E-8198287IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MNIPCQICPL KSNYLNDTQG IRDSGSEAXH STGDEEILGT NKLELRKLKR IREXEESLKX  60
SXRXXEEXER QELERLACVS SSFAACRLEI XAAEIFRKQX EALKKRELEK RLISLGYTFN  120
PDDGILLHHH LREKCLENAL GFYAILEEAD XYAKHPQNLI GLFLSEFIFI FSKNWVPLSV  180
FGRLTATDVT ENYRALAAGN VGYFFTRSRP NXTQPXTSTS TDHVQAGHWI FGKELDVLHQ  240
GEKVGVKQLL EYCAAGAKTG YKIIEYRLDP CPDNLKDGPW FLCKLYKDGS YMEVQSSL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.254050.0leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028958669.11e-161NAC domain-containing protein 76-like isoform X1
TrEMBLA0A498JXS31e-147A0A498JXS3_MALDO; Uncharacterized protein