PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000738631
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 229aa    MW: 26200 Da    PI: 11.2567
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000738631genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.4e-10126170549
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                    ++ rr+++NRe+ArrsR RK++ +e+L++ v  L   N++L ++l
  MDP0000738631 126 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRVVNRELNNRL 170
                    5789**********************************9998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.7E-8122171No hitNo description
SMARTSM003386.8E-13122186IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.346124187IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-10126174No hitNo description
PfamPF001701.8E-7126170IPR004827Basic-leucine zipper domain
CDDcd147021.98E-17127174No hitNo description
PROSITE patternPS000360129144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MKHQXIVPXL SSFPPPSXSK LEVQRAFVVA TMLSTLPANL PSDSLLHFSA FDGGFTPWDC  60
SDLFQATPSP KPVISTLSSS PVQSSKTVIS SSCSDDDPNR PDRTHANAKS CQNDDSNRTV  120
SVVDERKRRR MISNRESARR SRMRKQKHLE NLRNQVNRLR VVNRELNNRL RIVLYHFQRV  180
RTDNDRLRSD HVMLRQKLSD IRRILVFSQL QHFSSAWPCN TIIPEQTP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125129RKRRR
2125146RKRRRMISNRESARRSRMRKQK
3138145RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.164320.0bud| fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008378822.21e-162bZIP transcription factor 44
TrEMBLM5WJW11e-105M5WJW1_PRUPE; Uncharacterized protein
STRINGXP_008378822.11e-141(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.22e-22basic leucine-zipper 6