PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MDP0000773970

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

G2-like

Protein Properties

Length: 252aa MW: 28454.2 Da PI: 10.1763

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000773970	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.6	1.2e-32	13	67	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k rlrWt+eLH+rFveav++LGG+++AtPk il++m+v gLt++h+kSHLQkYR+ MDP0000773970 13 KDRLRWTQELHDRFVEAVTKLGGPDRATPKGILKAMSVSGLTIYHIKSHLQKYRI 67 68****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.561	10	70	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	2.1E-30	11	68	IPR009057	Homeodomain-like
SuperFamily	SSF46689	7.53E-18	12	67	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.5E-26	13	68	IPR006447	Myb domain, plants
Pfam	PF00249	3.4E-9	15	66	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence Send to blast
MGSRRSESSA ANKDRLRWTQ ELHDRFVEAV TKLGGPDRAT PKGILKAMSV SGLTIYHIKS 60 HLQKYRISKF IPESTNKGKL QRKNITEMLP NFGTTSAAQL NEAFKIMQIQ VQKNLQHKLE 120 SQGRFLERYS AERQNTNKNR PIVITKPRKA PLSKTSLPSL CDHSESNAKD FASDSEPDRS 180 ETQSSAEQFQ TLKKLRLHHH QNDPNVQFAL NSELYTAQSH SLLLPHEEDH ISFPWNFAAC 240 SSPLAVSSCF L*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-22	13	70	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-22	13	70	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-22	13	70	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-22	13	70	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-22	13	70	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-22	13	70	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-22	13	70	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-22	13	70	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008370148.1	0.0	myb family transcription factor PHL7-like
TrEMBL	A0A498K661	0.0	A0A498K661_MALDO; Uncharacterized protein
STRING	XP_008370148.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10659	25	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	8e-47	G2-like family protein

Link Out ? help Back to Top
Phytozome	MDP0000773970