PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000800550
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 377aa    MW: 43089.8 Da    PI: 5.3913
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000800550genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.61.3e-15111361128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                    +p G+ FhPtd+elv++   + v+g +l +  +++e++++ + +Pw   +k+ +    +++++ F + ++++++ kr+  + + g Wkat  ++  
  MDP0000800550  11 MPLGCXFHPTDQELVSYLRXRAVAGXPLXI-PFLHEFNLFGSaQPWVVWEKFGGnsfLDQDLFLFYELQHSKKNHKRS--IEAGGSWKATSFSRIE 103
                    689************555556678888888.78****9875449****754443223456778888877766554444..44589*****996655 PP

            NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +g+ +g k+ + + ++     +  +W+++ey l
  MDP0000800550 104 AL-DGNPIGEKRNFSYKNK--GCENDGEWLLEEYCL 136
                    55.9***********9843..333579*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-196157IPR003441NAC domain
PROSITE profilePS5100520.74911158IPR003441NAC domain
PfamPF023652.7E-1112136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MGIPNLGYWG MPLGCXFHPT DQELVSYLRX RAVAGXPLXI PFLHEFNLFG SAQPWVVWEK  60
FGGNSFLDQD LFLFYELQHS KKNHKRSIEA GGSWKATSFS RIEALDGNPI GEKRNFSYKN  120
KGCENDGEWL LEEYCLLPNP NPVAHSDRKV VLSRLKRSSR SRCANMNLPQ EFNEKPPIKK  180
RARKEILNEE PAIKRARKDL LNEKSPVKKT QRKELLNEKS PVKKTQRKEL LNEKPSIKKR  240
ARKELGSQIT SVNVITNSID QSNTPSVVPF DEIECNMNHD DECISSIDGN VAMPMYDVST  300
YPICFGSEEE FLLSNEKYLG ETGDFSLPVE GFDFTSDEEY LLRTDPLILD FERWLGTVES  360
PQEQLGCDQL LVDEWS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018506180.18e-98PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A498JWB40.0A0A498JWB4_MALDO; Uncharacterized protein
STRINGXP_008372743.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.15e-11NAC domain containing protein 57