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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
MDP0000827871 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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| Family |
GRAS |
| Protein Properties |
Length: 443aa MW: 49036.5 Da PI: 5.1523 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000827871 | genome | GDR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 291.1 | 3.1e-89 | 47 | 431 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfsh 95
++lLl+cA a++s+d +laq++++ l++ as+ gdp+qRl++ +++AL +r ++ +++ ++ +s+t ++ s+ +++++l ++++ P+++f++
MDP0000827871 47 EKLLLHCASALESNDVTLAQQVMWVLNNVASSVGDPNQRLTSWILRALISRASKVCPTPMNFNGSSST-STIPSRLMSVTELagYVDLIPWHRFGY 141
689***************************************************88887765544444.345566666666689************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.vak.rl 186
+ N+aI +a++g+ +vHi+Df+i++++QWp+L++aLa+Rpegpp lR+ + + ++ + + ee+g rL +f + +vpfefnv+ + +l
MDP0000827871 142 CASNSAIFKAIQGCPKVHILDFSITHCMQWPTLIDALAKRPEGPPLLRVSVPNWRPQVpplLNVSSEEVGLRLGNFSRFRDVPFEFNVIeN-SsSL 236
*************************************************9988755558899999***********************962.3244 PP
GRAS 187 edl.....eleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
e l ++++L+++++E+l+Vn++ l +l de+ ++ r+++L++++sl+P+++vvv++++d++++s+ r++ +++y + fdsl+
MDP0000827871 237 ELLvtselNPSSLDLREDEVLVVNCQNWLRYLSDEPXGTPGhqdgsMRNTFLNTIRSLNPRIIVVVDEDSDLSAPSLTSRITTCFNYLWIPFDSLD 332
4433333399999********************9887766544455788*********************************************** PP
GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
+ lp++s +r+ +E +g +i+n++ eg +r+er e+ + ++rl++ GF++ + e++a ++k+ll +++ g+ ++ e++ lvl+Wk+++ v
MDP0000827871 333 TFLPKDSTQRMDYESD-VGHKIENIIGFEGHKRIERLESGVTMSQRLRNIGFSSTIFCEETAREVKALLDEHA-SGWGMKREEDMLVLTWKGHNSV 426
****************.********************************************************.889999999************* PP
GRAS 369 svSaW 373
+++aW
MDP0000827871 427 FATAW 431
***** PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MKTEVRGSIT SISLQNPSTA LFNTSQGTSL TGALTGCLGS LDGACIEKLL LHCASALESN 60 DVTLAQQVMW VLNNVASSVG DPNQRLTSWI LRALISRASK VCPTPMNFNG SSSTSTIPSR 120 LMSVTELAGY VDLIPWHRFG YCASNSAIFK AIQGCPKVHI LDFSITHCMQ WPTLIDALAK 180 RPEGPPLLRV SVPNWRPQVP PLLNVSSEEV GLRLGNFSRF RDVPFEFNVI ENSSSLELLV 240 TSELNPSSLD LREDEVLVVN CQNWLRYLSD EPXGTPGHQD GSMRNTFLNT IRSLNPRIIV 300 VVDEDSDLSA PSLTSRITTC FNYLWIPFDS LDTFLPKDST QRMDYESDVG HKIENIIGFE 360 GHKRIERLES GVTMSQRLRN IGFSSTIFCE ETAREVKALL DEHASGWGMK REEDMLVLTW 420 KGHNSVFATA WVPNPNGLLI ED*
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