PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000876858
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family ERF
Protein Properties Length: 82aa    MW: 9360.94 Da    PI: 10.707
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000876858genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.35.3e-152066252
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52
                   +ykGV  +  +grWv+eIr p+    +  +++lg+++ +++Aa+a++aa  +
  MDP0000876858 20 HYKGVQMRA-WGRWVSEIRLPK----SgIKIWLGTYDAPDQAARAYDAAVYS 66
                   69***9887.**********94....35********************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.91E-182063No hitNo description
SuperFamilySSF541714.71E-152066IPR016177DNA-binding domain
SMARTSM003807.7E-142077IPR001471AP2/ERF domain
PfamPF008471.8E-82064IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-212067IPR001471AP2/ERF domain
PROSITE profilePS5103216.8322080IPR001471AP2/ERF domain
PRINTSPR003677.6E-82132IPR001471AP2/ERF domain
PRINTSPR003677.6E-84359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    Send to blast
MDMGRTSTLK KVWRQRAPGH YKGVQMRAWG RWVSEIRLPK SGIKIWLGTY DAPDQAARAY  60
DAAVYSLPLS PFLRKDICFV F*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009376369.12e-33PREDICTED: ethylene-responsive transcription factor ERF015
SwissprotQ6NLD54e-19ERF15_ARATH; Ethylene-responsive transcription factor ERF015
TrEMBLA0A498JYN61e-51A0A498JYN6_MALDO; Uncharacterized protein
STRINGXP_009376369.19e-33(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF154791011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77200.12e-11ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]