PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000879675
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family MYB_related
Protein Properties Length: 183aa    MW: 20647.5 Da    PI: 4.2126
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000879675genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.24.3e-094252446
                     HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
                     W++Ia++++ gRt++++k++w++
    MDP0000879675  4 WSKIAEYLP-GRTDNEIKNYWRT 25
                     *********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.883131IPR017930Myb domain
PfamPF002493.1E-7325IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.5E-10426IPR009057Homeodomain-like
SuperFamilySSF466896.01E-7435IPR009057Homeodomain-like
CDDcd001676.02E-7425No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MLGWSKIAEY LPGRTDNEIK NYWRTRVQKQ AKQLKCDVNS KQFQDAMRYV WIPRLIERIG  60
GLPESLPDQP RTCTTTTSES EYWVDTNFVP KTSGGTSSDS YDQVQACSIP TDRTSSGDEF  120
MTYPCSGQYG SENGSGYSQN GINSDIHDFE QIDYCSTGGD TSVENLWNEE NIWFLQQQLS  180
DG*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008348686.31e-128transcription factor MYB108-like
TrEMBLA0A498J6E01e-128A0A498J6E0_MALDO; Uncharacterized protein
STRINGXP_008381542.11e-131(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2566122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.16e-34myb domain protein 2