PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000882033
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 127aa    MW: 14156.1 Da    PI: 9.5631
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000882033genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.61.2e-198109298
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                    p+G++ hP+deelv +yL +kv+g+++++e+vi+e+d y ++e +d+ +    +  ++++++yfF+k + ++ tg+r  r++ sg+Wk      +v
  MDP0000882033   8 PVGYKCHPRDEELVGYYLYNKVRGTPFRVENVIPEIDPYgSMEARDIWNnngeQNLEKDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAKV 103
                    89***************************9******98835699999632343333367799**************************99888888 PP

            NAM  93 lskkge 98 
                    ++ k++
  MDP0000882033 104 KDPKTK 109
                    886443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-195117IPR003441NAC domain
PROSITE profilePS5100520.0117126IPR003441NAC domain
PfamPF023651.5E-118105IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MAHSDTFPVG YKCHPRDEEL VGYYLYNKVR GTPFRVENVI PEIDPYGSME ARDIWNNNGE  60
QNLEKDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AKVKDPKTKA LFGIEVILKK  120
ATVKKS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028945244.12e-82NAC domain-containing protein 68-like
TrEMBLA0A498ILP13e-75A0A498ILP1_MALDO; Uncharacterized protein
STRINGXP_008385689.11e-76(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.14e-13NAC domain containing protein 71