PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C002059P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 158aa    MW: 18261.2 Da    PI: 7.7001
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C002059P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.82.8e-09120148533
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                     ++ rr+++NRe+ArrsR RKk++ieeL+ 
  MELO3C002059P1 120 RKLRRMISNRESARRSRMRKKKQIEELQY 148
                     5789***********************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.554118150IPR004827Basic-leucine zipper domain
PfamPF001702.6E-7120148IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.8E-7120150No hitNo description
SuperFamilySSF579593.94E-7120152No hitNo description
CDDcd147027.43E-10121150No hitNo description
PROSITE patternPS000360123138IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MEMNEDLGFG ENPFNGSLKR HCSSHLMMET NRMMRRSEGD TNNDHEDHES NGSCGNFHRE  60
IVFPATMITT SQTPTNNNNN NSNVFSSPNS ASCYSNDNVL DVVEVLDVHR HHHLTVMAER  120
KLRRMISNRE SARRSRMRKK KQIEELQYQA RFSNLYI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819320.0LN681932.1 Cucumis melo genomic scaffold, anchoredscaffold00001.
GenBankLN7132660.0LN713266.1 Cucumis melo genomic chromosome, chr_12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008454802.11e-107PREDICTED: light-inducible protein CPRF3-like
TrEMBLA0A1S3C0641e-106A0A1S3C064_CUCME; light-inducible protein CPRF3-like
STRINGXP_008454802.11e-107(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3125622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.13e-11basic leucine-zipper 70