PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C007655P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 210aa    MW: 24575.6 Da    PI: 8.6234
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C007655P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.93.8e-1291135549
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                     ++ rr+++NRe+ArrsR+RK++ +e+L++ v +L+ eN++L ++l
  MELO3C007655P1  91 RKRRRMESNRESARRSRLRKQKHLENLRNLVNKLKVENRELSNRL 135
                     57899************************************9665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.8E-984135No hitNo description
SMARTSM003386.3E-1387151IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.0789152IPR004827Basic-leucine zipper domain
PfamPF001701.9E-991136IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.24E-991139No hitNo description
CDDcd147021.70E-1692136No hitNo description
PROSITE patternPS00036094109IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MLSASPTGSP YESMLENPFP AASTPWECHD YHNHGFLPGF FQMPEQPELL DVLQSPNPVI  60
SSSSSENRDE PEALDPGPCE PDRKVEVVDE RKRRRMESNR ESARRSRLRK QKHLENLRNL  120
VNKLKVENRE LSNRLRFTIY EVNRVRTEND HLQTEHTILR RKLMCSRQLL IFRQYQRQLG  180
YNAFEKPPTI SQSQSQYILN NNNNNLINC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19094RKRRR
290111RKRRRMESNRESARRSRLRKQK
3103109RRSRLRK
4103110RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818750.0LN681875.1 Cucumis melo genomic scaffold, anchoredscaffold00007.
GenBankLN7132620.0LN713262.1 Cucumis melo genomic chromosome, chr_8.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022950362.15e-93bZIP transcription factor RISBZ2-like
TrEMBLA0A0A0KJR41e-119A0A0A0KJR4_CUCSA; Uncharacterized protein
STRINGXP_008440425.11e-153(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.24e-25basic leucine-zipper 6