PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C010435P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 203aa    MW: 22643.4 Da    PI: 9.877
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C010435P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.51.6e-14122171554
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                     +r+rr++kNRe+A rsR+RK+a++ +Le +v  L++ N+ L+k+  + +k
  MELO3C010435P1 122 RRQRRMIKNRESAARSRARKQAYTNQLEHEVSCLKKTNSWLRKQEARSRK 171
                     69****************************************98666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.1E-12118182IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.174120165IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.13E-11122172No hitNo description
CDDcd147074.63E-20122165No hitNo description
PfamPF001706.3E-13122171IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.7E-14122170No hitNo description
PROSITE patternPS000360125140IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MSVEEAEIVH NPSSSSSSSP AAATVSLFLG KRNKDIKPQP DPMAEVSASA DGMDWIHYQQ  60
ALLIDSKSPV SQGVYNHGGI GVYNMEAMSM TTSASSNSDF QEGNCERKRR QVDDMKEKTI  120
ERRQRRMIKN RESAARSRAR KQAYTNQLEH EVSCLKKTNS WLRKQEARSR KTTFFKSNPS  180
AEIPTAAHQL GLLLDSDLHK QT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105110ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818670.0LN681867.1 Cucumis melo genomic scaffold, anchoredscaffold00013.
GenBankLN7132610.0LN713261.1 Cucumis melo genomic chromosome, chr_7.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008444114.11e-111PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like
TrEMBLA0A1S3BAD31e-110A0A1S3BAD3_CUCME; protein ABSCISIC ACID-INSENSITIVE 5-like
STRINGXP_004163678.11e-130(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2487333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36270.11e-18bZIP family protein